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Figure 3 | BMC Genomics

Figure 3

From: Massive parallel sequencing of mRNA in identification of unannotated salinity stress-inducible transcripts in rice (Oryza sativa L.)

Figure 3

Differential expression of genes in a 100-kb region on chromosome 2. Gene models based on RAP representative loci (Representative), RAP predicted genes supported by ESTs (Pred. with EST) or not supported by ESTs (Pred. w/o EST), and full length-cDNA sequences (FL-cDNA) are shown. Graphs indicate the average depths of 36-bp reads on the rice genome (IRGSP build 4) by xyplot in GBrowse; each position represents the number of reads covering each 100 bp per million mapped reads. The level of expression is normalized against shoot 0 h (no saline exposure) as the standard. The genes OsTPP1 (AK103391), RCc3 (AK109149), and AK058218 were expressed differentially.

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