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Table 1 Genes differentially expressed (P < 0.05) in control lines following Cre-mediated excision of the ABF3 transgene

From: Transcriptome analysis reveals absence of unintended effects in drought-tolerant transgenic plants overexpressing the transcription factor ABF3

Line Probe Set ID AGI Annotation M P
48 267442_at At2g19080 Metaxin-related 0.68 1.22 × 10-2
57 244939_at AtCg00065 Ribosomal protein s12 (Transplice part 1 of 2) (rps12.1)* 2.58 9.11 × 10-4
  244992_s_at AtCg00900/AtCg01240 Ribosomal protein s7 (rps7)* 1.50 2.97 × 10-2
  245608_at At4g14350 Protein kinase family protein -0.99 5.86 × 10-3
  247137_at At5g66210 Calcium-dependent protein kinase family protein (CDPK28) -1.20 3.35 × 10-2
  247754_at At5g59080 Expressed protein 1.33 2.20 × 10-2
  248812_at At5g47330 Palmitoyl protein thioesterase family protein 2.34 7.24 × 10-3
  252053_at At3g52400 Syntaxin, putative (SYP122) -1.09 3.60 × 10-2
  255655_at At4g00980 Zinc knuckle (CCHC-type) family protein 1.39 4.60 × 10-6
  259072_at At3g11700 Fasciclin-like arabinogalactin protein 18 precursor (FLA18) -0.73 2.29 × 10-3
  259348_at At3g03770 Leucine-rich repeat transmembrane protein kinase, putative 0.91 1.82 × 10-2
59 244939_at AtCg00065 Ribosomal protein s12 (Transplice part 1 of 2) (rps12.1)* 2.50 1.52 × 10-3
  244992_s_at AtCg00900/AtCg01240 Ribosomal protein s7 (rps7)* 1.51 2.69 × 10-2
  246727_at At5g28010 Bet v I allergen family protein 2.02 1.10 × 10-5
  262719_at At1g43590 Transposable element gene 1.29 1.30 × 10-2
  1. M is log2 fold change and P is FDR-adjusted P-value for Student's t-test.
  2. * indicates genes encoded by the chloroplast genome.