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Table 2 Genes differentially expressed (P < 0.05) in 35S:ABF3 transgenic plants

From: Transcriptome analysis reveals absence of unintended effects in drought-tolerant transgenic plants overexpressing the transcription factor ABF3

Line

Probe Set ID

AGI

Annotation

M

P

48

244964_at

AtCg00580

PSII cytochrome b559 (psbE)*

0.73

1.18 × 10-2

 

245608_at

At4g14350

Protein kinase family protein

-1.54

1.27 × 10-6

 

253263_at

At4g34000

ABA-responsive elements-binding factor 3 (ABF3)

3.35

2.09 × 10-11

 

253399_at

At4g32850

Nuclear poly(A) polymerase (nPAP)

0.7

2.22 × 10-2

 

256683_at

At3g52220

Expressed protein

-0.47

4.43 × 10-2

 

256940_at

At3g30720

Expressed protein

1.68

3.25 × 10-2

 

262719_at

At1g43590

Transposable element gene

2.02

3.12 × 10-6

57

253263_at

At4g34000

ABA-responsive elements-binding factor 3 (ABF3)

4.44

2.58 × 10-14

59

244992_s_at

AtCg00900/AtCg01240

Ribosomal protein s7 (rps7)*

-1.68

4.80 × 10-3

 

244996_at

AtCg00160

Ribosomal protein s2 (rps2)*

-1.28

9.05 × 10-3

 

245018_at

AtCg00520

Protein required for photosystem I assembly and stability (ycf4)*

-1.22

9.22 × 10-3

 

245019_at

AtCg00530

Hypothethical protein (ycf10/cemA)*

-1.34

1.48 × 10-2

 

245020_at

AtCg00540

Cytochrome f apoprotein (petA)*

-1.21

1.25 × 10-2

 

253263_at

At4g34000

ABA-responsive elements-binding factor 3 (ABF3)

2.04

1.35 × 10-6

 

261888_at

At1g80800

Pseudogene, 40S ribosomal protein S12 (rps12B)

-0.92

2.31 × 10-2

 

264683_at

At1g65580

Inositol or phosphatidylinositol phosphatase/FRAGILE FIBRE 3 (FRA3)

-0.71

2.34 × 10-2

  1. M is log2 fold change and P is FDR-adjusted P-value for Student's t-test.
  2. * indicates genes encoded by the chloroplast genome.