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Table 4 Examples of typical drought-responsive genes regulated similarly in 35S:ABF3 and control plant lines

From: Transcriptome analysis reveals absence of unintended effects in drought-tolerant transgenic plants overexpressing the transcription factor ABF3

    2 h 24 h
Probe Set ID AGI Annotation Control 35S:ABF3 Control 35S:ABF3
Osmolyte metabolism
251505_at At3g59050 Polyamine oxidase 3    1.365 1.409
266072_at At2g18700 Trehalose-phosphatase/synthase 11 (AtTPS11) 1.173 1.290   
254321_at At4g22590 Trehalose-6-phosphate phosphatase, putative    2.262 2.652
250467_at At5g10100 Trehalose-6-phosphate phosphatase, putative    1.716 1.560
LEA class proteins
250648_at At5g06760 LEA group 1 domain-containing protein 2.281 2.823 2.537 3.013
262128_at At1g52690 LEA protein, putative 3.087 3.667   
267261_at At2g23120 Expressed protein    1.651 1.688
266392_at At2g41280 LEA protein M10    2.258 2.473
252988_at At4g38410 Dehydrin, putative    2.692 2.516
Kinases
252592_at At3g45640 MAPK, putative (MPK3) 1.681 1.772 1.259 1.651
258682_at At3g08720 Serine/threonine protein kinase (PK19)    1.160 1.383
250673_at At5g07070 CBL-interacting protein kinase 2 (CIPK2) 1.408 1.261 1.551 1.827
254996_at At4g10390 Protein kinase family protein    2.177 1.763
249361_at At5g40540 Protein kinase, putative    2.768 3.066
248821_at At5g47070 Protein kinase, putative    1.547 1.487
Phosphatases
247957_at At5g57050 Abscisic acid-insensitive 2 (ABI2) 1.617 2.228   
247723_at At5g59220 Protein phosphatase 2C, putative 1.675 2.115   
251259_at At3g62260 Protein phosphatase 2C, putative 2.533 2.710 2.902 2.440
253323_at At4g33920 Protein phosphatase 2C family protein 1.385 1.615 1.767 1.779
Transcription factors
250582_at At5g07580 Ethylene-responsive element-binding family protein -1.878 -1.668   
265452_at At2g46510 Basic helix-loop-helix family protein    1.918 2.460
247509_at At5g62020 Heat shock transcription factor B2A (AtHSFB2A) 1.133 1.135 1.594 1.900
251272_at At3g61890 Homeobox-leucine zipper protein 12 (HB-12) 2.421 2.536 1.914 2.554
260237_at At1g74430 Myb family transcription factor (MYB95)    1.931 1.942
255753_at At1g18570 Myb family transcription factor (MYB51) 2.127 1.409   
254652_at At4g18170 WRKY family transcription factor (WRKY28) 3.564 2.709   
261648_at At1g27730 Zinc finger (C2H2 type) family protein (ZAT10) 3.665 3.663 4.978 5.127
  1. Values are log2 fold changes.
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