Skip to main content

Table 1 Genotype counts of cases and controls, nominal, and permutated P-values from the recessive model for the best KAD associated SNPs.

From: Knobbed acrosome defect is associated with a region containing the genes STK17b and HECW2 on porcine chromosome 15

SNP

Chr

Position, bp

Genotypes cases

Genotypes controls

Recessive, P-value

Permutated P-value

ALGA0086494

15

93805621

14/0/0

2/8/11

1.41E-07

0.0002

DRGA0015302

15

93835894

14/0/0

2/8/11

1.41E-07

0.0002

MARC0011300

15

94070930

14/0/0

2/8/11

1.41E-07

0.0002

CASI0005693

15

95156189

14/0/0

2/8/11

1.41E-07

0.0002

MARC0020403

15

90155667

12/2/0

0/7/14

1.66E-07

0.0002