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Table 2 Primers used for sequencing of the candidate genes HECW2 and STK17b.

From: Knobbed acrosome defect is associated with a region containing the genes STK17b and HECW2 on porcine chromosome 15

Gene

Exons

Position, bp

Length, bp

Forward primer

Reverse primer

HECW2

1

-

404

CTGGGACGTGTTTCAAGGTT

GATCTCTGACGCTTGCCTTC

HECW2

2-4

1-351

421

AGACGGGATGGCTAGCTCA

GATTTTTATCTCCGGCTCCA

HECW2

4-7

332-744

413

AAAAACAGGGGTGTGACTGG

CGGTGCCAGATTGGATTAGT

HECW2

5-2-10

483-1534

1052

TGAAGAACCCTGCTGTGATG

GTCTTCCGGCTTTGTCTGAG

HECW2

10-12/13

1403-2609

1207

GAGGAAGACCACGAGTTCCA

TACTCTGGTATCGCCGGTTC

HECW2

12-15

2543-2896

354

CCGCAGGTGCTGCAGAGGTC

GGTGTCCCGCCGGACTTTGG

HECW2

14-20/21

2783-3560

778

TTCCTCATCAGCCCAGAGTT

GCTGAGTACCTGGCGAGTTC

HECW2

20-22/23

3461-3800

340

ATGTCATACGTGCCTCCACA

CACTGTAATCCAGCCCTTCC

HECW2

21/22-30

3654-4675

1022

AAGGCCCAGGGAAATTAAAG

GGATGGGTATGGAGGGAGAT

HECW2

28-

4567-4815

249

AGGGAGTAATGGCCCAAGAA

CTAGAGGGCAGCTTCTGGA

STK17b

1-8

1-927

928

GTAAGCTCCGGTCTCCGTCT

TGTTGCTGTGGTAATAGGATCATA

STK17b

3-9

413-1100

707

TTTGCTGTGGTTAGGCAATG

AAAAGCCTCTGGATGAAGTCTGT

  1. The exons (based on human AB037722), position of the fragment within the HECW2 [GenBank HM562353] and STK17b [GenBank HM594868] mRNA and the length of the PCR amplicons are shown.