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Table 1 Content of ePKs in selected eukaryotes.

From: The kinome of Phytophthora infestans reveals oomycete-specific innovations and links to other taxonomic groups

 

Genes in subfamilya

  

Species

AGC

CAMK

CK1

CMGC

RGC

STE

TK

TKL

OTHER

Total ePKs

% of genesb

P. infestans

47

70

3

46

0

15

2

137

34

354

2.0

H. arabidopsidis

36

46

3

30

0

6

0

58

27

207

1.3

T. pseudonana

29

52

4

25

0

5

0

14

23

152

1.3

P. falciparum

5

13

1

18

0

0

0

5

23

65

1.5

P. tetraurelia

635

970

165

322

1

118

2

21

380

2614

6.6

O. sativa

59

163

33

151

0

73

0

1387

31

1897

4.7

D. discoideum

27

21

2

28

0

44

0

68

71

261

2.1

S. cerevisiae

17

21

4

34

0

18

0

0

36

130

2.2

H. sapiens

63

74

12

63

5

47

90

43

81

478

1.4

  1. aClassifications for P. infestans, H. arabidopsidis, and T. pseudonana are from this study. Assignments for the other species are from the literature [10, 11, 30, 59].
  2. bBased on estimated gene contents of 17,997 for P. infestans (Broad Institute v. 2); 15,551 for H. arabidopsidis (Virgina Bioinformatics Institute v. 8.3); 11,390 for T. pseudonana (Joint Genome Institute v. 3), 39,642 for P. tetraurelia (v. 1), 40,577 for O. sativa (MSU v. 6.1), 12,500 for D. discoideum (v. 2), 5,804 for S. cerevisiae; and 34,316 for H. sapiens (UCSC build 37.1).
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BMC Genomics

ISSN: 1471-2164

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