Genome-wide SNPs and re-sequencing of growth habit and inflorescence genes in barley: implications for association mapping in germplasm arrays varying in size and structure

Table 2 Interactions with the highest LRT -log p value for vernalization sensitivity

Locus1	Chrom.	Position	Locus2	Chrom.	Position	LRT -log p	Rank
ZCCT_Hc_PA	4H	119.1	1_0624	2H	59.2	50.1	1
ZCCT_Hc_PA	4H	119.1	1_0012	2H	59.2	50.1	1
VRN-H2_AT	4H	119.1	1_0624	2H	59.2	50.0	3
VRN-H2_AT	4H	119.1	1_0012	2H	59.2	50.0	3
VRN-H2_AT	4H	119.1	VRN-H1_AT	5H	137.2	49.6	5
VRN-H2_AT	4H	119.1	1_1200	5H	117.5	31.6	6
VRN-H2_AT	4H	119.1	2_1027	3H	8.9	31.5	7
ZCCT_Hc_PA	4H	119.1	1_1200	5H	117.5	31.4	8
ZCCT_Hc_PA	4H	119.1	VRN-H1_AT	5H	137.2	30.3	9
1_1294	6H	93.7	1_1200	5H	117.5	28.8	10

ISSN: 1471-2164