Table 4 Alternative splicing (AS) events and genes detected by RNA-seq
From: Comparison of transcriptomic landscapes of bovine embryos using RNA-Seq
AS type | Number of AS events detected | Number of genes undergoing AS | ||||
|---|---|---|---|---|---|---|
| Â | Combined dataset | Blastocysts | Degeneratives | Combined dataset | Blastocysts | Degeneratives |
Exon skipping | 2,892 | 1,747 | 1,252 | 1,625 | 1,067 | 887 |
Alternative 5' splice site | 662 | 419 | 259 | 421 | 268 | 186 |
Alternative 3' splice site | 872 | 539 | 372 | 772 | 438 | 330 |
Total | 4,426 | 2,705 | 1,883 | 2,032 | 1,566 | 1,277 |