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Table 4 Complete list of homeobox-containing gene sequence candidates.

From: Smed454 dataset: unravelling the transcriptome of Schmidtea mediterranea

ID BLASTX HIT ACCESSION NUMBER E-VALUE
F6AJIXP02J3PG4 arrowhead [Schistosoma mansoni] XP_002575389 6,00E-09
90_9219 barh homeobox protein [Schistosoma mansoni] XP_002571667 9,00E-26
F6AJIXP02J2YIH brain-specific homeobox [Tribolium castaneum] EFA05724 5,00E-05
90_23337 cut, isoform C [Drosophila melanogaster] NP_001138174 3,00E-18
F6AJIXP02HF7ZO cut, isoform C [Drosophila melanogaster] NP_001138174 2,00E-10
90_8368 Cut-like homeobox 1 [Mus musculus] AAH14289 2,00E-23
90_3019 distalless, Dlx-1 [Platynereis dumerilii] CAJ38799 8,00E-07
90_14605 DjotxB [Dugesia japonica] BAF80446 4,00E-65
F6AJIXP02FICZL Eye absent protein [Dugesia japonica] CAD89530 1,00E-74
F6AJIXP02IV6Y0 gsx family homeobox protein [Schistosoma mansoni] XP_002574396 3,00E-12
90_24312 H6-like-homeobox [Drosophila melanogaster] NP_732244 2,00E-15
90_8293 homeobox protein distal-less dlx [Schistosoma mansoni] XP_002574393 4,00E-07
F6AJIXP02JJ1QK Homeobox protein DTH-2 [Girardia tigrina] Q00401 3,00E-40
90_8753 homeobox prox 1 [Danio rerio] NP_956564 5,00E-19
90_12057 homeodomain protein Tlx [Capitella teleta] ACH89436 1,00E-23
90_8083 Hox class homeodomain protein AbdBa Hox protein [Schmidtea mediterranea]. ABW79872 1,00E-26
90_7618 Hox class homeodomain protein DjAbd-Ba [Dugesia japonica] BAB41079 2,00E-16
90_6369 Hox class homeodomain protein DjAbd-Bb [Dugesia japonica] BAB41078 1,00E-108
F6AJIXP02ILMDY Hox class homeodomain protein DjAbd-Bb [Dugesia japonica] BAB41078 3,00E-33
F6AJIXP02HN15J_2 Hypothetical protein CBG18604 [Caenorhabditis briggsae] XP_002638395 7,00E-05
90_28860 ladybird homeobox corepressor 1-like protein [Mus musculus NP_001103213 XP_001479028 8,00E-33
90_6629 lim domain binding protein [Schistosoma mansoni] XP_002576324 6,00E-05
F6AJIXP02GEYYP lim domain homeobox 3/4 transcription factor [Saccoglossus kowalevskii) NP_001158395 4,00E-23
90_10783 lim homeobox protein [Schistosoma mansoni] XP_002579046 2,00E-13
90_11027 lim homeobox protein [Schistosoma mansoni] XP_002579046 1,00E-26
90_10828 LIM homeobox transcription factor 1 alpha [Mus musculus] EDL39177 2,00E-14
90_13775 LIM motif-containing protein kinase 1 [Schistosoma japonicum] CAX72746 2,00E-11
90_9432 LIM-homeodomain protein AmphiLim1/5 [Branchiostoma floridae] ABD59002 5,00E-05
90_8762 LIM-homeodomain transcription factor islet [Branchiostoma floridae AAF34717 2,00E-15
90_6339 Nk1 protein [Platynereis dumerilii] CAJ38797 1,00E-11
F6AJIXP02G077U paired-like homeobox 2a [Danio rerio] NP_996953 5,00E-16
90_6703 phtf [Drosophila melanogaster] NP_610232 2,00E-55
90_25126 PLOX2-Dj [Dugesia japonica] BAA77402 2,00E-42
90_21567 PLOX4-Dj [Dugesia japonica] BAA77404 2,00E-21
90_23010 PLOX5-Dj [Dugesia japonica] BAA77405 6,00E-22
F6AJIXP02IVOTI PLOX5-Dj [Dugesia japonica] BAA77405 1,00E-17
90_21710 pre-B-cell leukemia transcription factor 1 2 3 4 (pbx) [Schistosoma mansoni) XP_002572195 2,00E-27
90_3405 PREDICTED: similar to UBX domain protein 4 [Hydra magnipapillata] XP_002162754 2,00E-06
F6AJIXP02HI24E PREP homeodomain-like protein [Schmidtea mediterranea] ADB54565 2,00E-47
F6AJIXP02JSRJD PREP homeodomain-like protein [Schmidtea mediterranea] ADB54565 1,00E-32
F6AJIXP02GVFDM prospero-like protein [Schistosoma mansoni] XP_002578694 1,00E-21
F6AJIXP02IUJ5Q prospero-like protein [Schistosoma mansoni] XP_002578694 4,00E-25
F6AJIXP02HZIDG short stature homeobox protein 2 isoform c [Homo sapiens NP_001157150 5,00E-08
90_7545 SIX homeobox 2 [Gallus gallus] NP_001038160 7,00E-36
F6AJIXP02HBGHT SJCHGC06100 protein [Schistosoma japonicum] AAW24487 6,00E-11
90_3395 UBX domain containing 8, isoform CRA_d [Mus musculus] EDL41153 3,00E-14
90_1176 UBX domain-containing protein 4 [Mus musculus] NP_080666 1,00E-06
90_2625 ubx6(yeast)-related [Schistosoma mansoni] XP_002576054 2,00E-16
90_24438 visual system homeobox protein [Tribolium castaneum] CAX64460 9,00E-23
F6AJIXP02G5JJX_1 Zn finger homeodomain 2 [Tribolium castaneum] EFA01350 1,00E-05