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Table 2 Allelic expression analysis in T16H mice

From: Transcriptional changes in response to X chromosome dosage in the mouse: implications for X inactivation and the molecular basis of Turner Syndrome

  

Female 1

Female 2

  

gDNA

cDNA

gDNA

cDNA

Huwe1

rs29297624

CT

C

CT

C

 

rs29296351

CG

G

CG

G

 

rs29294894*

GT

G

GT

G

 

rs29295859

CT

C

CT

C

Arhgef6

rs13475263*

AC

A

AC

A

Nsbp1

rs29091513*

CT

C

CT

C

  1. Allelic expression of X chromosome genes in two F1 females, from a cross of a 40,T(X;16)16H female and an FVB/NHsd male, detected in genomic DNA (gDNA) and in cDNA from different tissues (liver, kidney, muscle and brain). All SNPs in the table were analysed by direct sequencing in liver; those marked as * were also verified by SNaPshot in liver, kidney, muscle and brain. In all cases only the allele on the X chromosome carrying the translocation (active) was detected in the cDNA.