Table 1 List of methylated proteins and methylation sites discovered by FindMod.
Gene name | Swiss-Prot accession | Description | Methylated residuesa |
|---|---|---|---|
ARC40 | P38328 | Actin-related protein 2/3 complex subunit 1 | mK121 |
ATP2 | P00830 | ATP synthase subunit beta, mitochondrial precursor | mK196 |
CDC11 | P32458 | Cell division control protein 11 | dR35 |
DIP2 | Q12220 | U3 small nucleolar RNA-associated protein 12 | mK350 |
DNF1 | P32660 | Probable phospholipid-transporting ATPase DNF1 | mK541 |
ECM29 | P38737 | Proteasome component ECM29 | mR542, dR1112 |
EDE1 | P34216 | EH domain-containing and endocytosis protein 1 | mR252 |
EMG1 | Q06287 | Essential for mitotic growth 1 | mK147 |
ERB1 | Q04660 | Ribosome biogenesis protein ERB1 | mK577, mK581 |
FKS1 | P38631 | 1,3-beta-glucan synthase component FKS1 | mR946, dR946, dR952, mR962, dR962, dR1527 |
GCD10 | P41814 | tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6 | mK436, mR447 |
GCN1 | P33892 | Translational activator GCN1 | dK1446 |
GCN20 | P43535 | Protein GCN20 | dK656 |
GUS1 | P46655 | Glutamyl-tRNA synthetase, cytoplasmic | mR371 |
HAS1 | Q03532 | ATP-dependent RNA helicase HAS1 | dK444 |
IMD3 | P50095 | Probable inosine-5'-monophosphate dehydrogenase IMD3 | mR168 |
ISW1 | P38144 | ISWI chromatin-remodeling complex ATPase ISW1 | mK14 |
LEA1 | Q08963 | U2 small nuclear ribonucleoprotein A' | dR141 |
MPG1 | P41940 | Mannose-1-phosphate guanyltransferase | dK299 |
MRPL17 | P36528 | 54S ribosomal protein L17, mitochondrial precursor | mK70 |
MRPL20 | P22354 | 54S ribosomal protein L20, mitochondrial precursor | mK104 |
NIP1 | P32497 | Eukaryotic translation initiation factor 3 subunit C | mK514 |
NOC2 | P39744 | Nucleolar complex protein 2 | mK384 |
NOG2 | P53742 | Nucleolar GTP-binding protein 2 | dR336 |
NOT1 | P25655 | General negative regulator of transcription subunit 1 | mR256 |
POL12 | P38121 | DNA polymerase alpha subunit B | mK84 |
PRP43 | P53131 | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 | dK662 |
PRT1 | P06103 | Eukaryotic translation initiation factor 3 subunit B | mR572 |
PSD2 | P53037 | Phosphatidylserine decarboxylase proenzyme 2 precursor | mR252 |
PYK1 | P00549 | Pyruvate kinase 1 | mR216, dR216 |
RPA2 | P22138 | DNA-directed RNA polymerase I subunit RPA2 | dK513 |
RPB2 | P08518 | DNA-directed RNA polymerase II subunit RPB2 | mR496 |
RPL16A | P26784 | 60S ribosomal protein L16-A | dK148 |
RPL18A, RPL18B | P07279 | 60S ribosomal protein L18 | mR105 |
RPL1A, RPL1B | P53030 | 60S ribosomal protein L1 | dK207 |
RPL20A, RPL20B | P0C2I0 | 60S ribosomal protein L20 | dK47 |
RPL27A, RPL27B | P0C2H6, P0C2H7 | 60S ribosomal protein L27 | dR15, dK133 |
RPL2A, RPL2B | P05736 | 60S ribosomal protein L2 | dR21 |
RPL3 | P14126 | 60S ribosomal protein L3 | mR275, dK384 |
RPL4A | P10664 | 60S ribosomal protein L4-A | dR84, mK104 |
RPL7A | P05737 | 60S ribosomal protein L7-A | mR218 |
RPL7B | Q12213 | 60S ribosomal protein L7-B | mR218 |
RPL8B | P29453 | 60S ribosomal protein L8-B | mK15, mK43, dK241 |
RPN2 | P32565 | 26S proteasome regulatory subunit RPN2 | mK376 |
RPS11A, RPS11B | P26781 | 40S ribosomal protein S11 | mR67 |
RPS13 | P05756 | 40S ribosomal protein S13 | mK140 |
RPS17A | P02407 | 40S ribosomal protein S17-A | dK59 |
RRP5 | Q05022 | rRNA biogenesis protein RRP5 | dR215, dK769 |
RSC1 | P53236 | Chromatin structure-remodeling complex subunit RSC1 | mR454 |
RSC30 | P38781 | Chromatin structure-remodeling complex protein RSC30 | mR692 |
RVB2 | Q12464 | RuvB-like protein 2 | mK412 |
SKI3 | P17883 | Superkiller protein 3 | dK1088 |
SMB1 | P40018 | Small nuclear ribonucleoprotein-associated protein B | mK138, mK145 |
SNF2 | P22082 | Transcription regulatory protein SNF2 | dK1028 |
SNU114 | P36048 | 114 kDa U5 small nuclear ribonucleoprotein component | dK356, mK935 |
SSB1 | P11484 | Heat shock protein SSB1 | dR513 |
SSB2 | P40150 | Heat shock protein SSB2 | dR513 |
TDH3 | P00359 | Glyceraldehyde-3-phosphate dehydrogenase 3 | dR11 |
TIF32 | P38249 | Eukaryotic translation initiation factor 3 subunit A | dK192 |
TUB2 | P02557 | Tubulin beta chain | dR318 |
URA7 | P28274 | CTP synthase 1 | dK28 |
USO1 | P25386 | Intracellular protein transport protein USO1 | mK119 |
UTP22 | P53254 | U3 small nucleolar RNA-associated protein 22 | mK1158 |
VPS52 | P39904 | Vacuolar protein sorting-associated protein 52 | mR224 |
YKU70 | P32807 | ATP-dependent DNA helicase II subunit 1 | dR549 |
YPR097W | Q06839 | PX domain-containing protein YPR097W | dK249 |