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Table 4 Frequencies of different repeat motifs of di- and trinucleotide repeats in EST-SSRs from E. sagittatum

From: Development of a EST dataset and characterization of EST-SSRs in a traditional Chinese medicinal plant, Epimedium sagittatum (Sieb. Et Zucc.) Maxim

Repeat motif

Repeat number

total

%

 

5

6

7

8

9

10

>10

  

AG/CT

-

128

103

103

56

43

110

543

19.3

AT/AT

-

47

52

33

15

11

53

211

7.5

AC/GT

-

59

16

11

7

4

4

101

3.6

AAG/CTT

384

171

47

39

7

9

6

663

23.6

ACC/GGT

234

55

11

10

2

 

0

312

11.1

AAC/GTT

116

23

18

5

1

1

1

165

5.9

AGC/CGT

58

25

9

1

  

0

93

3.3

ACG/CTG

51

16

3

1

  

0

71

2.5

AGG/CCT

37

26

4

   

0

67

2.4

AAT/ATT

47

14

3

1

  

0

65

2.3

ACT/ATG

45

7

2

1

 

1

1

57

2

AGT/ATC

35

16

2

 

1

1

1

56

2

CCG/CGG

3

      

3

0.1

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BMC Genomics

ISSN: 1471-2164

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