Complex sense-antisense architecture of TNFAIP1/POLDIP2 on 17q11.2 represents a novel transcriptional structural-functional gene module involved in breast cancer progression

Table 1 P values obtained by pair-wise comparisons of matrices for five genes in the SFGM group and six 'neighbouring' genes

Breast cancer grade	SFGM matrix ¹		NG matrix ¹		SFGM matrix/NG matix ²
	U	S	U	S	U	S
G3	1.5E-12	2.7E-10	7.6E-01	5.9E-01	1.0E-16	1.0E-16
G3-like	3.4E-11	8.9E-03	2.1E-01	8.8E-01	1.0E-16	1.1E-01
G1-like	2.1E-14	9.9E-02	4.5E-01	6.7E-01	1.0E-16	1.0E-16
G1	1.1E-04	1.6E-14	9.1E-01	7.7E-01	1.0E-16	1.0E-16
Total group	1.2E-16	1.3E-15	8.3E-01	6.1E-01	1.0E-16	1.0E-15

¹ -- P values were calculated using Bartlett's bootstrap test. ² -- averaged P values were calculated using Box's M test (see description of procedures in Materials and methods section). U -- Uppsala cohort; S -- Stockholm cohort.

ISSN: 1471-2164