Table 5 Distribution of top 40 protein sequences containing at least two copies of EPIYA motif
From: Effector prediction in host-pathogen interaction based on a Markov model of a ubiquitous EPIYA motif
Protein Name | Number of proteins (number of genuses) | |||||||
|---|---|---|---|---|---|---|---|---|
| Â | Total | Archaea | Viruses | Bacteria | Protista | Fungi | Metazoa | Viridiplantae |
CagA | 1015(1) | Â | Â | 1015(1) | Â | Â | Â | Â |
hypothetical protein | 689(186) | 15(10) | 10(6) | 242(88) | 162(19) | 78(28) | 127(25) | 55(11) |
ATP* | 81(21) | 2(2) | Â | 68(11) | 6(4) | 4(3) | Â | 1(1) |
Ankryin | 55(7) | Â | Â | 51(3) | Â | Â | 4(4) | Â |
DNA* | 52(34) | 3(3) | Â | 40(25) | 7(4) | 1(1) | Â | 1(1) |
Kinase | 43(28) | 5(2) | Â | 23(15) | 4(3) | Â | 11(8) | Â |
zinc finger protein | 43(11) | Â | Â | Â | Â | Â | 43(11) | Â |
TPR repeat protein | 33(15) | Â | Â | 33(15) | Â | Â | Â | Â |
Polyprotein | 24(2) | Â | 24(2) | Â | Â | Â | Â | Â |
SecA | 23(14) | Â | Â | 23(14) | Â | Â | Â | Â |
Peptidase | 19(12) | 1(1) | Â | 16(9) | 1(1) | Â | 1(1) | Â |
dynein heavy chain | 17(13) | Â | Â | Â | 4(2) | 1(1) | 11(9) | 1(1) |
elongation factor 2 | 15(7) | Â | Â | Â | 10(2) | 1(1) | 4(4) | Â |
Palmdelphin | 14(9) | Â | Â | Â | Â | Â | 14(9) | Â |
tRNA* | 14(11) | 2(1) | Â | 10(8) | 1(1) | 1(1) | Â | Â |
glycogen synthase | 13(1) | Â | Â | 13(1) | Â | Â | Â | Â |
GTP-binding | 13(3) | Â | Â | 12(2) | 1(1) | Â | Â | Â |
transcriptional regulator | 13(8) | 1(1) | Â | 9(4) | Â | 3(3) | Â | Â |
unc-119 homolog | 13(6) | Â | Â | Â | Â | Â | 13(6) | Â |
FAT tumor suppressor homolog 3 | 12(9) | Â | Â | Â | Â | Â | 12(9) | Â |
nuclear ribonucleoprotein | 12(9) | Â | Â | Â | 1(1) | 10(7) | Â | 1(1) |
4-alpha-glucanotransferase | 9(1) | Â | Â | 9(1) | Â | Â | Â | Â |
paternally expressed 3 | 8(6) | Â | Â | Â | Â | Â | 8(6) | Â |
Striatin | 8(7) | Â | Â | Â | Â | Â | 8(7) | Â |
Tarp | 8(1) | Â | Â | 8(1) | Â | Â | Â | Â |
nuclear autoantigen | 7(6) | Â | Â | Â | Â | Â | 7(6) | Â |
putative mannosyltransferase | 7(1) | Â | Â | 7(1) | Â | Â | Â | Â |
Ubiquitin | 7(6) | Â | Â | Â | 5(4) | 2(2) | Â | Â |
26S proteasome regulatory subunit | 6(3) | Â | Â | Â | Â | Â | Â | 6(3) |
cell division protein | 6(4) | 3(3) | Â | 1(1) | Â | Â | Â | Â |
centaurin, delta 3 | 6(5) | Â | Â | Â | Â | Â | 6(5) | Â |
fat tumor suppressor homolog 2 | 6(5) | Â | Â | Â | Â | Â | 6(5) | Â |
glycosyl transferase | 6(5) | Â | Â | 6(5) | Â | Â | Â | Â |
guanine nucleotide exchange factor | 6(6) | Â | Â | Â | Â | Â | 6(6) | Â |
cytochrome c oxidase subunit VI | 5(4) | Â | Â | Â | 5(4) | Â | Â | Â |
PEG3 | 5(5) | Â | Â | Â | Â | Â | 5(5) | Â |
polyketide synthase | 5(4) | Â | Â | 3(3) | 2(1) | Â | Â | Â |
polysaccharide biosynthesis protein | 5(3) | Â | Â | 5(3) | Â | Â | Â | Â |
TatD-related deoxyribonuclease | 5(1) | Â | Â | 5(1) | Â | Â | Â | Â |
translation initiation factor | 5(4) | Â | Â | 2(2) | 2(1) | 1(1) | Â | Â |