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Figure 3 | BMC Genomics

Figure 3

From: Robust inference of the context specific structure and temporal dynamics of gene regulatory network

Figure 3

Modules identified by ECTDISA ECTDISA can uncover both temporal transcriptional modules (C3) and constant time modules (C1, C2, etc). Starting from 189 initial gene sets, ECTDISA was able to identify 119 clusters in the KSHV infection data, which were further merged into 7 modules. The 3rd module (C3) is a very good example of a temporal module, where genes of the module behave quite differently between 0-3 hours but share a common trend afterwards.

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