Table 1 Start or stop codons generated by RNA editing in nuclear transcripts and statistics of edited nuclear transcripts in Arabidopsis
From: RNA editing of nuclear transcripts in Arabidopsis thaliana
Codons generated in nuclear protein-coding transcriptsa | Editing patterns | Total No. | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C-U | U-C | A-G | G-A | U-G | G-U | U-A | A-U | C-G | G-C | A-C | C-A | ||
AUG | 15 | 0 | 1 | 0 | 1 | 13 | 1 | 1 | 0 | 0 | 0 | 3 | 35 |
UAA | 1 | 0 | 0 | 1 | 0 | 25 | 1 | 18 | 0 | 0 | 0 | 51 | 97 |
UAG | 1 | 0 | 4 | 3 | 0 | 40 | 0 | 26 | 0 | 0 | 0 | 0 | 74 |
UGA | 0 | 0 | 3 | 0 | 1 | 69 | 0 | 0 | 0 | 0 | 0 | 11 | 84 |
Editing patterns | Total No. of edited transcripts (pre-miRNAs) b | ||||||||||||
C-U | U-C | A-G | G-A | U-G | G-U | U-A | A-U | C-G | G-C | A-C | C-A | ||
No. of edited nuclear protein-coding transcripts | 37 | 136 | 165 | 64 | 65 | 158 | 30 | 107 | 6 | 11 | 199 | 56 | 355 |
No. of edited pre-miRNAs | 4 | 9 | 8 | 11 | 13 | 11 | 8 | 2 | 1 | 1 | 7 | 7 | 36 |