Table 5 Comparison of the top 10 ranking predictions with results from other predictors
From: Predicting RNA-binding residues from evolutionary information and sequence conservation
Rank | ProteRNA | PiRaNhA | Pprint | BindN | PRIP |
|---|---|---|---|---|---|
(a) Rank by MCC | |||||
1 | 2PJP_A | 2QAM_Z | 2QAM_Z | 2QAM_Z | 2PY9_C |
2 | 2QAM_Z | 2QBE_T | 1VS8_O | 2PY9_C | 2QAM_Z |
3 | 2PY9_C | 2DER_B | 2PJP_A | 1VS8_O | 2HYI_D |
4 | 1VS8_O | 2G4B_A | 2PY9_C | 2QBE_T | 2NQP_B |
5 | 2G4B_A | 1VS8_O | 2GYA_3 | 2G4B_A | 2IY5_A |
6 | 2Q66_A | 2PY9_C | 2DER_B | 2DER_B | 1VS8_O |
7 | 2I82_C | 2G8K_A | 2G4B_A | 2J0Q_A | 2I82_C |
8 | 2DER_B | 2OZB_B | 2QBE_T | 2IPY_B | 2V47_C |
9 | 2QBE_T | 2V47_C | 2DR2_A | 2HVR_A | 2GJE_A |
10 | 2DR2_A | 2GJE_D | 2QKK_F | 2GTT_G | 2JEA_B |
MCC of Rank 1 | 0.6668 | 0.6415 | 0.6006 | 0.4364 | 0.5521 |
MCC of Rank 10 | 0.3063 | 0.2719 | 0.2390 | 0.1951 | 0.0517 |
(b) Rank by precision | |||||
1 | 2Q66_A | 2GYA_3 | 2GYA_3 | 2QAM_Z | 2QAM_Z |
2 | 2PJP_A | 2QBE_T | 2QAM_Z | 2QBE_T | 2PY9_C |
3 | 2PY9_C | 2QAM_Z | 2QBE_T | 1VS8_O | 1VS8_O |
4 | 2QAM_Z | 1VS8_O | 1VS8_O | 2PY9_C | 2QBE_T |
5 | 2DER_B | 2OZB_B | 2PY9_C | 2GYA_3 | 2I82_C |
6 | 1VS8_O | 2PY9_C | 2DER_B | 2G4B_A | 2V47_C |
7 | 2GYA_3 | 2DER_B | 2V47_C | 2J0Q_A | 2IY5_A |
8 | 2I82_C | 2V47_C | 2I82_C | 2I82_C | 2GYA_3 |
9 | 2QBE_T | 2G4B_A | 2G4B_A | 2DER_B | 2G4B_A |
10 | 2G8K_A | 2Q66_A | 2GJE_A | 2V47_C | 2GJE_A |
Precision of Rank 1 | 100.00% | 100.00% | 76.92% | 76.47% | 75.00% |
Precision of Rank 10 | 50.00% | 35.71% | 25.00% | 24.00% | 13.33% |