Alternative splicing enriched cDNA libraries identify breast cancer-associated transcripts

BMC Genomics

Table 6 Gene expression analysis under the influence of ERBB2 over-expression.

Gene Symbol	Cell line	Variant	Size (bp)	Concentration (ng/ul)	Normalized Concentration	ASSET/ Variant	C5.2/Hb4a
SFRS9	Hb4a	ASSET	232	6.5	3.7	36.2	-4.8
		variant	100	0.2	0.1
	C5.2	ASSET	232	6.4	2.9	7.5
		variant	100	0.9	0.4
FLNA	Hb4a	ASSET	500	24.9	14.1	95.7	-4.8
		variant	377	0.3	0.2
	C5.2	ASSET	500	23.0	10.4	20.0
		variant	377	1.2	0.5
ALDH3A2	Hb4a	ASSET	470	20.0	11.4	10.0	1.0
		variant	610	2.0	1.1
	C5.2	ASSET	470	24.6	11.0	10.3
		variant	610	2.4	1.0
TRIP6	Hb4a	ASSET	203	12.6	7.2	8.9	-3.4
		variant	636	1.4	0.8
	C5.2	ASSET	203	3.5	1.6	2.6
		variant	636	1.3	0.6
PTPLA	Hb4a	ASSET	324	10.8	6.1	83.1	1.2
		variant	456	0.1	0.1
	C5.2	ASSET	324	16.8	7.5	98.4
		variant	456	0.2	0.1
RPS2	Hb4a	ASSET	187	13.7	7.8	1.4	1.1
		variant	390	12.2	5.5
	C5.2	ASSET	187	1.8	1.0	1.6
		variant	390	1.4	0.6

ISSN: 1471-2164