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Table 5 Single nucleotide polymorphism (SNPs) statistics

From: Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

SNPs

Number

SNPs

Number

Transitions

 

Transversions

 

A<->G

6,694

A<->T

1,793

C<->T

6,902

G<->T

1,547

  

C<->G

1,548

  

A<->C

1,496

Total

13,596 (68%)

Total

6,384(32%)

  1. Type and number of transition and transversions are shown for putative high quality single nucleotide polymorphism (SNPs) identified in the Cucurbita database.
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BMC Genomics

ISSN: 1471-2164

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