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Table 3 C. pneumoniae CWL029 putative Inc proteins, see Table 2 for details.

From: Multi-genome identification and characterization of chlamydiae-specific type III secretion substrates: the Inc proteins

Sequence ID

0rtholog Group # (1)

Length (aa)

TM segments (2)

TM coordinates (3)

Additional feature(s)

CPn0007

688

964

6

[7-30]10[40-61] & [116-140]10[ 150-171] & [226-250]6[256-281]

DUF1978 coiled coils

CPn0010

688

297

2

[2-16]9[25-46]

extended coiled coils

CPn0011

688

241

2

[30-53]6[59-85]

extended coiled coils

CPn0026

no ortholog

288

2

[37-63]5[68-89]

 

CPn0028

950

261

3

[48-64]9[73-87]2[89-103]

DUF648

CPn0034

908

416

2

[52-76]6[82-105]

Macro domain

CPn0041

688

449

2

[2-16]9[25-46]

DUF1978 coiled coils

CPn0043

688

642

2

[29-52]7[59-80]

DUF1978 extended coiled coils

CPn0045

688

574

2

[2-16]9[25-46]

DUF1978 coiled coils

CPn0049

505

160

3

[49-69] & [102-118]2[120-141]

 

CPn0065

774

576

4

[33-55]6[61-88] & [242-263]6[269-291]

coiled coils

CPn0066

462

577

5

[358-379]14[393-413]12[425-445] & [484-507] & [542-566]

DUF687

CPn0067

no ortholog

367

2

[34-58]6[64-84]

 

CPn0069

462

617

5

[398-419]15[434-455]10[466-488] & [526-547] & [585-608]

DUF687

CPn0072

772

335

3

[91-109]6[115-135] & [166-194]

 

CPn0124

688

485

2

[2-18]10[28-49]

DUF1978 coiled coils

CPn0126

688

759

2

[2-17]10[27-48]

DUF1978 extended coiled coils

CPn0130

no ortholog

165

2

[29-51]5[56-77]

 

CPn0131

no ortholog

344

2

[36-55]6[61-81]

 

CPn0132

no ortholog

325

2

[29-53]6[59-84]

 

CPn0146

287

161

3

[6-25]12[37-59]6[64-91]

 

CPn0147

455

149

2

[43-64]6[ 70-93]

 

CPn0150

553

1537

4

[79-99]6[105-124] & [841-861]6[867-886]

extended coiled coils

CPn0157

916

142

2

[60-74]2[76-90]

DUF648

CPn0164

no ortholog

167

2

[37-58]6[64-86]

 

CPn0166

no ortholog

111

2

[35-58]6[ 64-86]

 

CPn0169

no ortholog

264

2

[32-53]6[59-80]

 

CPn0173

no ortholog

91

2

[37-55]7[62-79]

 

CPn0174

568

156

2

[50-74]11[85-107]

coiled coils

CPn0181

no ortholog

133

2

[73-91]16[107-125]

 

CPn0186

264

390

2

[38-62]6[68-88]

similarity to CT119 IncA extended coiled coils

CPn0203

916

265

2

[25-43]20[63-82]

DUF648

CPn0211

no ortholog

98

2

[37-61]7[68-91]

 

CPn0212

no ortholog

393

2

[38-61]6[67-88]

 

CPn0214

no ortholog

404

2

[2-20]9[29-52]

coiled coils

CPn0215

no ortholog

419

2

[31-57]6[63-88]

extended coiled coils

CPn0216

no ortholog

145

2

[25-51]6[57-81]

 

CPn0221

804

136

3

[52-72]12[84-105]5[110-130]

 

CPn0223

461

126

2

[54-72]26[98-123]

 

CPn0225

no ortholog

223

2

[32-55]9[64-89]

coiled coils

CPn0226

804

134

2

[56-76]14[90-121]

 

CPn0230

682

226

2

[41-65]12[77-100]

 

CPn0240

713

388

4

[79-93]12[105-133] & [188-215]7[222-248]

 

CPn0241

713

384

4

[88-104]11[115-144] & [201-228]6[234-261]

 

CPn0242

63

144

3

[30-54] & [92-113]10[123-141]

 

CPn0243

63

141

3

[29-53] & [94-115]8[123-13]

 

CPn0266

129

231

4

[33-57]11[68-90] & [124-146]6[152-173]

 

CPn0267

129

263

4

[37-62]6[69-94] & [156-178]6[184-205]

 

CPn0277

no ortholog

169

2

[78-100]9[109-139]

 

CPn0284

no ortholog

165

2

[33-56]2[58-82]

 

CPn0285

475

515

2

[32-54]11[65-86]

 

CPn0288

132

382

6

[61-82]8[90-113] & [182-203]2[205-225]23[248-262]2[264-278]

 

CPn0291

79

176

2

[100-129]7[136-166]

Inclusion Membrane Protein B (IncB)

CPn0292

26

203

2

[127-151]19[170-193]

Inclusion Membrane Protein C (IncC)

CPn0308

no ortholog

121

2

[29-53]6[59-81]

 

CPn0312

236

151

3&SP

[SP 1-24] [37-55] & [94-112]6[118-137]

 

CPn0334

580

171

3&SP

[SP 1-26] [50-77]17[94-118]19[137-158]

 

CPn0334

580

171

3&SP

[SP 1-26] [50-77]17[94-118]19[137-158]

 

CPn0352

654

419

2

[32-51]6[57-80]

DUF1389

CPn0354

no ortholog

447

2

[26-50]2[52-74]

DUF1389

CPn0355

no ortholog

433

2

[28-48]6[54-77]

DUF1389

CPn0357

no ortholog

283

2

[27-52]5[57-76]

DUF1389

CPn0365

no ortholog

339

2

[33-54]6[60-79]

 

CPn0366

no ortholog

155

2

[49-71]14[85-112]

 

CPn0367

722

245

2

[40-61]6[67-86]

Macro domain

CPn0369

722

404

2

[39-60]6[66-86]

Macro domain

CPn0370

722

371

2

[36-56]5[61-80]

Macro domain

CPn0371

no ortholog

119

2

[43-65]6[71-92]

 

CPn0372

no ortholog

105

2

[36-62]6[68-90]

 

CPn0375

no ortholog

165

4

[49-73]6[79-103]9[112-131]6[137-155]

 

CPn0381

462

591

5

[372-393]15[408-428]11[439-459] & [498-521] & [557-581]

DUF687

CPn0404

402

339

3

[123-137]2[139-153]4[157-174]

 

CPn0431

901

111

2

[39-60]11[71-92]

 

CPn0432

no ortholog

101

2

[36-59]6[65-86]

 

CPn0440

431

212

2

[54-72]6[78-101]

coiled coils

CPn0442

485

172

3

[44-75]12[87-111]6[117-137]

 

CPn0443

667

417

4

[53-74]6[80-102]12[114-138]6[144-165]

 

CPn0458

no ortholog

695

2

[6-22]23[45-66]

DUF562 and DUF575

CPn0474

141

589

10

[58-81]6[87-109]20[129-150]15[165-183]29[212-237]6[243-266] & [345-367]6[373-400]12[472-492]6[498-518]

 

CPn0480

238

218

2

[101-127]10[137-159]

 

CPn0481

no ortholog

536

2

[31-52]6[58-84]

 

CPn0517

no ortholog

279

2

[39-63]7[70-93]

 

CPn0523

898

110

2

[26-47]2[49-73]

 

CPn0524

800

359

2

[35-57]6[63-82]

Macro domain

CPn0537

160

119

3

[6-32]21[53-69]27[96-115]

 

CPn0554

411

96

2

[33-55]9[64-87]

 

CPn0556

515

196

2

[74-98]6[104-125]

15 kDa Cysteine-Rich Protein (CrpA)

CPn0565

106

366

2

[39-58]6[64-85]

 

CPn0585

842

651

2

[52-75]6[81-103]

extended coiled coils

CPn0601

316

106

2

[36-61]12[73-101]

 

CPn0602

467

334

2

[29-51]6[57-80]

Tetratrico Peptide Repeats (TPRs)

CPn0753

612

282

2

[228-250]6[256-276]

 

CPn0755

286

401

2

[14-34]6[40-58]

UPF0242 extended coiled coils

CPn0770

344

264

2

[161-181]2[183-199]

 

CPn0822

340

158

3

[46-60]2[62-83]20[103-134]

 

CPn0829

no ortholog

185

2

[108-131]18[149-180]

 

CPn0830

no ortholog

172

3

[6-22] & [91-115]16[131-163]

 

CPn0834

496

154

2

[98-121]12[133-150]

 

CPn0882

462

379

5

[169-188]7[195-217]13[230-247]20[267-285] & [334-358]

DUF687

CPn0930

no ortholog

158

2

[28-51]5[56-77]

 

CPn0938

597

158

2

[2-22]6[28-50]

 

CPn0994

176

681

2

[553-571]12[583-602]

coiled coils

CPn1008

151

432

4

[34-55]2[ 57-77]3[80-99]6[105-130]

extended coiled coils

CPn1027

no ortholog

527

2

[34-58]6[64-89]

coiled coils

CPn1029

226

279

6

[28-46]14[60-84]21[105-132]17[149-175]21[196-217]20[237-263]

 

CPn1051

no ortholog

103

2

[36-62]5[67-91]

 

CPn1054

688

811

2

[28-52]11[63-83]

DUF1978 extended coiled coils

CPn1055

688

276

2

[2-16]5[21-46]

DUF1978 extended coiled coils

TOTAL

107 proteins

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