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Table 3 Frameshift mutations in MmmSC PG1

From: Mycoplasma mycoides, from "mycoides Small Colony" to "capri". A microevolutionary perspective

Mmc CDS N°

Detection of Protein a

Product (Mmc)

MmmSC CDS

Detection of Protein a

0210

-

recG

0022, 0023 and 0024

-

0350

-

CHP

0036 and 0037

-

0370

-

CHP

0040 and 0041

-

0630

-

TMB protein

0075 and 0076

-

1000

+

lipoprotein

0103 and 0104

+

1500

-

lipoprotein

0169, 0170 and 0171

-

1910

-

TMB protein

0227 and 0228

-

1870

+

pepA

0234 and 0235

-

1650

-

CHP

0242 and 0243

-

2550

-

lipoprotein

0285 and 0286

-

2540

-

lipoprotein

0285 and 0286

-

2530

+

TMB protein

0287 and 0288

+

2330

-

protein phosphatase

0307 and 0308

-

2320

-

TMB protein

0309 and 0310

-

2290

-

TMB interrupted by ICE

0314 and 0315

-

3100

-

lipoprotein

0317 and 0318

-

3270

-

TMB and protease

0343 and 0344

-

3280

-

lipoprotein

0345 and 0346

-

3560

-

CHP

0378 and 0379

-

3790

-

TMB protein

0399 and 0400

-

4410

-

putative abc transporteur

0459 and 0460

-

4510

-

TMB protein

0470 and 0471

+

4520

+

TMB and efflux

0472 and 0473

+

4840

-

endopetidase O

0504

-

4930

-

TMB substrate transport

0513, 0514 and 0515

-

4980

-

TMB protein

0521, 0522 and 0523

-

5170

-

TMB protein

0536 and 0537

-

5250

+

CHP

0545 and 0546

-

5570

-

CHP

0589 and 0590

-

5940

-

lipoprotein

0631 and 0632

-

5970

-

TMB protein

0636 and 0637

-

6080

+

CHP

0652 and 0654

-

6100

+

CHP

0656, 0657 and 0658

-

6510

-

TMB protein

0694 and 0695

-

6580

-

TMB protein

0705 and 0706

-

6620

+

lipoprotein

0710 and 0711

+

7000

-

transcriptional regulator

0750 and 0751

-

7010

-

TMB protein

0753 and 0754

-

7200

+

lipoprotein

0772 and 0773

-

7340

+

HAD hydrolase

0792 and 0793

-

7420

-

CHP

0819 and 0820

-

8740

-

TMB protein

0919 and 0920

-

8500

-

lgt

0936 and 0937

-

8860

+

CHP

1012, 1013 and 1014

-

8970

-

TMB protein

1023, 1024 and 1025

-

  1. a "+" indicates that the protein was detected by LC-MS/MS with at least 2 disctinct peptides. MmmSC CDS should be considered as pseudogenes unless there was a sequencing error leading to an artefactual frameshift mutation.
  2. List of CDS with frameshift mutations in the MmmSC PG1 genome as evidenced by comparison with Mmc CDS.