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Table 3 Core of commonly expressed genes 8 h post-infection

From: Comparative tissue transcriptomics reveal prompt inter-organ communication in response to local bacterial kidney infection

Gene

Function

Serpine1

serine (or cysteine) peptidase inhibitor, clade E, member 1

Nfkbia

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha

Oasl1

2'-5' oligoadenylate synthetase-like 1

Ifi44

interferon-induced protein 44

Cxcl2

chemokine (C-X-C motif) ligand 2

Tifa

TRAF-interacting protein with forkhead-associated domain

Ccl3

chemokine (C-C motif) ligand 3

Selp

selectin, platelet

Zfp36 *

zinc finger protein 36

Irf7

interferon regulatory factor 7

Ifi205 *

interferon activated gene 205

Birc3

baculoviral IAP repeat-containing 3

Myd88

myeloid differentiation primary response gene 88

Ccl19

chemokine (C-C motif) ligand 19

Socs3 *

suppressor of cytokine signaling 3

Nfkbie

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon

Ier3

immediate early response 3

Pfkfb3

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3

Ccl4

chemokine (C-C motif) ligand 4

Ptx3

pentraxin related gene

Il1b

interleukin 1 beta

Glipr2

GLI pathogenesis-related 2

Arid5a

AT rich interactive domain 5A (Mrf1 like)

Cxcl10 *

chemokine (C-X-C motif) ligand 10

Ifit3 *

interferon-induced protein with tetratricopeptide repeats 3

Cxcl1

chemokine (C-X-C motif) ligand 1

Irg1 *

immunoresponsive gene 1

Gadd45b

growth arrest and DNA-damage-inducible 45 beta

Parp14

poly (ADP-ribose) polymerase family, member 14

Serpina3n

serine (or cysteine) peptidase inhibitor, clade A, member 3N

Ifi47 *

interferon gamma inducible protein 47

Il1rn

interleukin 1 receptor antagonist

Rgs16

regulator of G-protein signaling 16

Il6

interleukin 6

Akap12

A kinase (PRKA) anchor protein (gravin) 12

Upp1

uridine phosphorylase 1

Icam1

intercellular adhesion molecule 1

Slc15a3

solute carrier family 15, member 3

Tmem2

transmembrane protein 2

Oas1 g

2'-5' oligoadenylate synthetase 1G

Sod2 *

superoxide dismutase 2, mitochondrial

Ifih1

interferon induced with helicase C domain 1

BC006779

cDNA sequence BC006779

Steap4

STEAP family member 4

Parp9

poly (ADP-ribose) polymerase family, member 9

Slfn4

schlafen 4

Timp1

tissue inhibitor of metalloproteinase 1

Plek

pleckstrin

Nfkb2

nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100

Ptges

prostaglandin E synthase

Ripk2

receptor (TNFRSF)-interacting serine-threonine kinase 2

Cflar *

CASP8 and FADD-like apoptosis regulator

Cebpb

CCAAT/enhancer binding protein (C/EBP), beta

Cxcl11 *

chemokine (C-X-C motif) ligand 11

Rcan1

regulator of calcineurin 1

Hk2

hexokinase 2

Ccl2

chemokine (C-C motif) ligand 2

Pvr

poliovirus receptor

Cd274 *

CD274 antigen

Tubb6

tubulin, beta 6

Ch25h

cholesterol 25-hydroxylase

Irf1 *

interferon regulatory factor 1

Slc7a2

solute carrier family 7 (cationic amino acid transporter, y+ system), member 2

Trib1

tribbles homolog 1 (Drosophila)

Vcam1

vascular cell adhesion molecule 1

Pde4b

phosphodiesterase 4B, cAMP specific

S100a9

S100 calcium binding protein A9 (calgranulin B)

Psme2 *

proteasome (prosome, macropain) 28 subunit, beta

Psmb9 *

proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)

Lcn2 *

lipocalin 2

Lcp1

lymphocyte cytosolic protein 1

Cdkn1a

cyclin-dependent kinase inhibitor 1A (P21)

Cp *

ceruloplasmin

Ptgs2 *

prostaglandin-endoperoxide synthase 2

Psmb8 *

proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7)

Hck *

hemopoietic cell kinase

Lif

leukemia inhibitory factor

Nfkb1

nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105

Cxcl9 *

chemokine (C-X-C motif) ligand 9

Stat1 *

signal transducer and activator of transcription 1

  1. *Genes induced by IFN-γ