TY - JOUR AU - Veyrunes, F. AU - Waters, P. D. AU - Miethke, P. AU - Rens, W. AU - McMillan, D. AU - Alsop, A. E. AU - Grützner, F. AU - Deakin, J. E. AU - Whittington, C. M. AU - Schatzkamer, K. PY - 2008 DA - 2008// TI - Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes JO - Genome research VL - 18 UR - https://doi.org/10.1101/gr.7101908 DO - 10.1101/gr.7101908 ID - Veyrunes2008 ER - TY - JOUR AU - Warren, W. C. AU - Hillier, L. W. AU - Marshall Graves, J. A. AU - Birney, E. AU - Ponting, C. P. AU - Grutzner, F. AU - Belov, K. AU - Miller, W. AU - Clarke, L. AU - Chinwalla, A. T. PY - 2008 DA - 2008// TI - Genome analysis of the platypus reveals unique signatures of evolution JO - Nature VL - 453 UR - https://doi.org/10.1038/nature06936 DO - 10.1038/nature06936 ID - Warren2008 ER - TY - JOUR AU - Graves, J. A. PY - 2006 DA - 2006// TI - Sex chromosome specialization and degeneration in mammals JO - Cell VL - 124 UR - https://doi.org/10.1016/j.cell.2006.02.024 DO - 10.1016/j.cell.2006.02.024 ID - Graves2006 ER - TY - JOUR AU - Skaletsky, H. AU - Kuroda-Kawaguchi, T. AU - Minx, P. J. AU - Cordum, H. S. AU - Hillier, L. AU - Brown, L. G. AU - Repping, S. AU - Pyntikova, T. AU - Ali, J. AU - Bieri, T. PY - 2003 DA - 2003// TI - The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes JO - Nature VL - 423 UR - https://doi.org/10.1038/nature01722 DO - 10.1038/nature01722 ID - Skaletsky2003 ER - TY - JOUR AU - Sinclair, A. H. AU - Berta, P. AU - Palmer, M. S. AU - Hawkins, J. R. AU - Griffiths, B. L. AU - Smith, M. J. AU - Foster, J. W. AU - Frischauf, A. M. AU - Lovell-Badge, R. AU - Goodfellow, P. N. PY - 1990 DA - 1990// TI - A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif JO - Nature VL - 346 UR - https://doi.org/10.1038/346240a0 DO - 10.1038/346240a0 ID - Sinclair1990 ER - TY - JOUR AU - Berta, P. AU - Hawkins, J. R. AU - Sinclair, A. H. AU - Taylor, A. AU - Griffiths, B. L. AU - Goodfellow, P. N. AU - Fellous, M. PY - 1990 DA - 1990// TI - Genetic evidence equating SRY and the testis-determining factor JO - Nature VL - 348 UR - https://doi.org/10.1038/348448A0 DO - 10.1038/348448A0 ID - Berta1990 ER - TY - JOUR AU - Ross, M. T. AU - Grafham, D. V. AU - Coffey, A. J. AU - Scherer, S. AU - McLay, K. AU - Muzny, D. AU - Platzer, M. AU - Howell, G. R. AU - Burrows, C. AU - Bird, C. P. PY - 2005 DA - 2005// TI - The DNA sequence of the human X chromosome JO - Nature VL - 434 UR - https://doi.org/10.1038/nature03440 DO - 10.1038/nature03440 ID - Ross2005 ER - TY - JOUR AU - Lahn, B. T. AU - Page, D. C. PY - 1999 DA - 1999// TI - Four evolutionary strata on the human X chromosome JO - Science (New York, NY VL - 286 UR - https://doi.org/10.1126/science.286.5441.964 DO - 10.1126/science.286.5441.964 ID - Lahn1999 ER - TY - CHAP AU - Ohno, S. PY - 1967 DA - 1967// BT - Sex Chromosomes and sex-linked genes PB - Springer-Verlag-New York CY - Berlin UR - https://doi.org/10.1007/978-3-642-88178-7 DO - 10.1007/978-3-642-88178-7 ID - Ohno1967 ER - TY - JOUR AU - Wilson, M. A. AU - Makova, K. D. PY - 2009 DA - 2009// TI - Evolution and survival on eutherian sex chromosomes JO - PLoS genetics VL - 5 UR - https://doi.org/10.1371/journal.pgen.1000568 DO - 10.1371/journal.pgen.1000568 ID - Wilson2009 ER - TY - JOUR AU - Graves, J. A. PY - 1998 DA - 1998// TI - Evolution of the mammalian Y chromosome and sex-determining genes JO - The Journal of experimental zoology VL - 281 UR - https://doi.org/3.0.CO;2-B DO - 3.0.CO;2-B ID - Graves1998 ER - TY - JOUR AU - Charlesworth, B. AU - Charlesworth, D. PY - 2000 DA - 2000// TI - The degeneration of Y chromosomes JO - Philosophical transactions of the Royal Society of London VL - 355 UR - https://doi.org/10.1098/rstb.2000.0717 DO - 10.1098/rstb.2000.0717 ID - Charlesworth2000 ER - TY - JOUR AU - Roze, D. AU - Barton, N. H. PY - 2006 DA - 2006// TI - The Hill-Robertson effect and the evolution of recombination JO - Genetics VL - 173 UR - https://doi.org/10.1534/genetics.106.058586 DO - 10.1534/genetics.106.058586 ID - Roze2006 ER - TY - JOUR AU - Pearks Wilkerson, A. J. AU - Raudsepp, T. AU - Graves, T. AU - Albracht, D. AU - Warren, W. AU - Chowdhary, B. P. AU - Skow, L. C. AU - Murphy, W. J. PY - 2008 DA - 2008// TI - Gene discovery and comparative analysis of X-degenerate genes from the domestic cat Y chromosome JO - Genomics VL - 92 UR - https://doi.org/10.1016/j.ygeno.2008.06.012 DO - 10.1016/j.ygeno.2008.06.012 ID - Pearks Wilkerson2008 ER - TY - JOUR AU - Lahn, B. T. AU - Page, D. C. PY - 1997 DA - 1997// TI - Functional coherence of the human Y chromosome JO - Science (New York, NY VL - 278 UR - https://doi.org/10.1126/science.278.5338.675 DO - 10.1126/science.278.5338.675 ID - Lahn1997 ER - TY - JOUR AU - Hurst, L. D. PY - 1994 DA - 1994// TI - Embryonic growth and the evolution of the mammalian Y chromosome. I. The Y as an attractor for selfish growth factors JO - Heredity VL - 73 UR - https://doi.org/10.1038/hdy.1994.127 DO - 10.1038/hdy.1994.127 ID - Hurst1994 ER - TY - JOUR AU - Marshall Graves, J. A. PY - 2000 DA - 2000// TI - Human Y chromosome, sex determination, and spermatogenesis - a feminist view JO - Biology of reproduction VL - 63 UR - https://doi.org/10.1095/biolreprod63.3.667 DO - 10.1095/biolreprod63.3.667 ID - Marshall Graves2000 ER - TY - JOUR AU - Church, D. M. AU - Goodstadt, L. AU - Hillier, L. W. AU - Zody, M. C. AU - Goldstein, S. AU - She, X. AU - Bult, C. J. AU - Agarwala, R. AU - Cherry, J. L. AU - DiCuccio, M. PY - 2009 DA - 2009// TI - Lineage-specific biology revealed by a finished genome assembly of the mouse JO - PLoS biology VL - 7 UR - https://doi.org/10.1371/journal.pbio.1000112 DO - 10.1371/journal.pbio.1000112 ID - Church2009 ER - TY - JOUR AU - Bhowmick, B. K. AU - Satta, Y. AU - Takahata, N. PY - 2007 DA - 2007// TI - The origin and evolution of human ampliconic gene families and ampliconic structure JO - Genome research VL - 17 UR - https://doi.org/10.1101/gr.5734907 DO - 10.1101/gr.5734907 ID - Bhowmick2007 ER - TY - JOUR AU - Murphy, W. J. AU - Pearks Wilkerson, A. J. AU - Raudsepp, T. AU - Agarwala, R. AU - Schaffer, A. A. AU - Stanyon, R. AU - Chowdhary, B. P. PY - 2006 DA - 2006// TI - Novel gene acquisition on carnivore Y chromosomes JO - PLoS genetics VL - 2 UR - https://doi.org/10.1371/journal.pgen.0020043 DO - 10.1371/journal.pgen.0020043 ID - Murphy2006 ER - TY - JOUR AU - Hughes, J. F. AU - Skaletsky, H. AU - Pyntikova, T. AU - Minx, P. J. AU - Graves, T. AU - Rozen, S. AU - Wilson, R. K. AU - Page, D. C. PY - 2005 DA - 2005// TI - Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee JO - Nature VL - 437 UR - https://doi.org/10.1038/nature04101 DO - 10.1038/nature04101 ID - Hughes2005 ER - TY - JOUR AU - Lahn, B. T. AU - Page, D. C. PY - 1999 DA - 1999// TI - Retroposition of autosomal mRNA yielded testis-specific gene family on human Y chromosome JO - Nat Genet VL - 21 UR - https://doi.org/10.1038/7771 DO - 10.1038/7771 ID - Lahn1999 ER - TY - JOUR AU - Kleiman, S. E. AU - Yogev, L. AU - Hauser, R. AU - Botchan, A. AU - Bar-Shira Maymon, B. AU - Schreiber, L. AU - Paz, G. AU - Yavetz, H. PY - 2003 DA - 2003// TI - Members of the CDY family have different expression patterns: CDY1 transcripts have the best correlation with complete spermatogenesis JO - Human genetics VL - 113 UR - https://doi.org/10.1007/s00439-003-0990-9 DO - 10.1007/s00439-003-0990-9 ID - Kleiman2003 ER - TY - JOUR AU - Dorus, S. AU - Gilbert, S. L. AU - Forster, M. L. AU - Barndt, R. J. AU - Lahn, B. T. PY - 2003 DA - 2003// TI - The CDY-related gene family: coordinated evolution in copy number, expression profile and protein sequence JO - Human molecular genetics VL - 12 UR - https://doi.org/10.1093/hmg/ddg185 DO - 10.1093/hmg/ddg185 ID - Dorus2003 ER - TY - JOUR AU - Lahn, B. T. AU - Tang, Z. L. AU - Zhou, J. AU - Barndt, R. J. AU - Parvinen, M. AU - Allis, C. D. AU - Page, D. C. PY - 2002 DA - 2002// TI - Previously uncharacterized histone acetyltransferases implicated in mammalian spermatogenesis JO - Proceedings of the National Academy of Sciences of the United States of America VL - 99 UR - https://doi.org/10.1073/pnas.082248899 DO - 10.1073/pnas.082248899 ID - Lahn2002 ER - TY - JOUR AU - Kleiman, S. E. AU - Lagziel, A. AU - Yogev, L. AU - Botchan, A. AU - Paz, G. AU - Yavetz, H. PY - 2001 DA - 2001// TI - Expression of CDY1 may identify complete spermatogenesis JO - Fertility and sterility VL - 75 UR - https://doi.org/10.1016/S0015-0282(00)01639-3 DO - 10.1016/S0015-0282(00)01639-3 ID - Kleiman2001 ER - TY - JOUR AU - Slee, R. AU - Grimes, B. AU - Speed, R. M. AU - Taggart, M. AU - Maguire, S. M. AU - Ross, A. AU - McGill, N. I. AU - Saunders, P. T. AU - Cooke, H. J. PY - 1999 DA - 1999// TI - A human DAZ transgene confers partial rescue of the mouse Dazl null phenotype JO - Proceedings of the National Academy of Sciences of the United States of America VL - 96 UR - https://doi.org/10.1073/pnas.96.14.8040 DO - 10.1073/pnas.96.14.8040 ID - Slee1999 ER - TY - JOUR AU - Ruggiu, M. AU - Speed, R. AU - Taggart, M. AU - McKay, S. J. AU - Kilanowski, F. AU - Saunders, P. AU - Dorin, J. AU - Cooke, H. J. PY - 1997 DA - 1997// TI - The mouse Dazla gene encodes a cytoplasmic protein essential for gametogenesis JO - Nature VL - 389 UR - https://doi.org/10.1038/37987 DO - 10.1038/37987 ID - Ruggiu1997 ER - TY - JOUR AU - Houston, D. W. AU - King, M. L. PY - 2000 DA - 2000// TI - A critical role for Xdazl, a germ plasm-localized RNA, in the differentiation of primordial germ cells in Xenopus JO - Development (Cambridge, England) VL - 127 ID - Houston2000 ER - TY - JOUR AU - Eberhart, C. G. AU - Maines, J. Z. AU - Wasserman, S. A. PY - 1996 DA - 1996// TI - Meiotic cell cycle requirement for a fly homologue of human Deleted in Azoospermia JO - Nature VL - 381 UR - https://doi.org/10.1038/381783a0 DO - 10.1038/381783a0 ID - Eberhart1996 ER - TY - JOUR AU - Yen, P. H. PY - 2004 DA - 2004// TI - Putative biological functions of the DAZ family JO - International journal of andrology VL - 27 UR - https://doi.org/10.1111/j.1365-2605.2004.00469.x DO - 10.1111/j.1365-2605.2004.00469.x ID - Yen2004 ER - TY - JOUR AU - Kee, K. AU - Angeles, V. T. AU - Flores, M. AU - Nguyen, H. N. AU - Reijo Pera, R. A. PY - 2009 DA - 2009// TI - Human DAZL, DAZ and BOULE genes modulate primordial germ-cell and haploid gamete formation JO - Nature VL - 462 UR - https://doi.org/10.1038/nature08562 DO - 10.1038/nature08562 ID - Kee2009 ER - TY - JOUR AU - Liu, W. -. S. AU - Wang, A. AU - Uno, Y. AU - Galitz, D. AU - Beattie, C. W. AU - Ponce de León, F. A. PY - 2007 DA - 2007// TI - Genomic structure and transcript variants of the bovine DAZL gene JO - Cytogenet Genome Res VL - 116 UR - https://doi.org/10.1159/000097419 DO - 10.1159/000097419 ID - Liu2007 ER - TY - JOUR AU - Wang, A. AU - Yasue, H. AU - Li, L. AU - Takashima, M. AU - Ponce de León, F. A. AU - Liu, W. -. S. PY - 2008 DA - 2008// TI - Molecular characterization of the bovine chromodomain Y-like genes JO - Animal genetics VL - 39 UR - https://doi.org/10.1111/j.1365-2052.2008.01706.x DO - 10.1111/j.1365-2052.2008.01706.x ID - Wang2008 ER - TY - JOUR AU - Elsik, C. G. AU - Tellam, R. L. AU - Worley, K. C. AU - Gibbs, R. A. AU - Muzny, D. M. AU - Weinstock, G. M. AU - Adelson, D. L. AU - Eichler, E. E. AU - Elnitski, L. AU - Guigo, R. PY - 2009 DA - 2009// TI - The genome sequence of taurine cattle: a window to ruminant biology and evolution JO - Science (New York, NY VL - 324 UR - https://doi.org/10.1126/science.1169588 DO - 10.1126/science.1169588 ID - Elsik2009 ER - TY - JOUR AU - Ponce de León, F. A. PY - 1996 DA - 1996// TI - Microdissected chromosome libraries for livestock species JO - Arch Zootec VL - 45 ID - Ponce de León1996 ER - TY - JOUR AU - Liu, W. -. S. AU - Ponce de León, F. A. PY - 2007 DA - 2007// TI - Mapping of the Bovine Y Chromosome JO - Electronic Journal of Biology VL - 3 ID - Liu2007 ER - TY - JOUR AU - Liu, W. -. S. AU - Wang, A. AU - Yang, Y. AU - Chang, T. -. C. AU - Landrito, E. AU - Yasue, H. PY - 2009 DA - 2009// TI - Molecular characterization of the DDX3Y gene and its homologs in cattle JO - Cytogenetic and Genome Research VL - 126 UR - https://doi.org/10.1159/000266168 DO - 10.1159/000266168 ID - Liu2009 ER - TY - JOUR AU - Liu, W. -. S. AU - Mariani, P. AU - Beattie, C. W. AU - Alexander, L. J. AU - Ponce de León, F. A. PY - 2002 DA - 2002// TI - A radiation hybrid map for the bovine Y Chromosome JO - Mammalian Genome VL - 13 UR - https://doi.org/10.1007/s00335-001-2133-8 DO - 10.1007/s00335-001-2133-8 ID - Liu2002 ER - TY - CHAP AU - Liu, W. -. S. ED - Jiang, Z. ED - Ott, T. L. PY - 2010 DA - 2010// TI - Comparative Genomics of the Y Chromosome and Male Fertility BT - Reproductive genomics in domestic animals PB - Wiley-Blackwell CY - Ames, Iowa UR - https://doi.org/10.1002/9780813810898.ch6 DO - 10.1002/9780813810898.ch6 ID - Liu2010 ER - TY - JOUR AU - Liu, W. -. S. AU - Ponce de León, F. A. PY - 2004 DA - 2004// TI - Assignment of SRY, ANT3, and CSF2RA to the bovine Y chromosome by FISH and RH mapping JO - Animal Biotechnology VL - 15 UR - https://doi.org/10.1081/LABT-200032337 DO - 10.1081/LABT-200032337 ID - Liu2004 ER - TY - JOUR AU - Del Mastro, R. G. AU - Lovett, M. PY - 1997 DA - 1997// TI - Isolation of coding sequences from genomic regions using direct selection JO - Methods in molecular biology (Clifton, NJ VL - 68 ID - Del Mastro1997 ER - TY - JOUR AU - Ponce de León, F. A. AU - Ambady, S. AU - Hawkins, G. A. AU - Kappes, S. M. AU - Bishop, M. D. AU - Robl, J. M. AU - Beattie, C. W. PY - 1996 DA - 1996// TI - Development of a bovine X chromosome linkage group and painting probes to assess cattle, sheep, and goat X chromosome segment homologies JO - Proceedings of the National Academy of Sciences of the United States of America VL - 93 UR - https://doi.org/10.1073/pnas.93.8.3450 DO - 10.1073/pnas.93.8.3450 ID - Ponce de León1996 ER - TY - JOUR AU - Kapustin, Y. AU - Souvorov, A. AU - Tatusova, T. AU - Lipman, D. PY - 2008 DA - 2008// TI - Splign: algorithms for computing spliced alignments with identification of paralogs JO - Biology direct VL - 3 UR - https://doi.org/10.1186/1745-6150-3-20 DO - 10.1186/1745-6150-3-20 ID - Kapustin2008 ER - TY - JOUR AU - Thomsen, P. D. AU - Jorgensen, C. B. PY - 1994 DA - 1994// TI - Distribution of two conserved, male-enriched repeat families on the Bos taurus Y chromosome JO - Mamm Genome VL - 5 UR - https://doi.org/10.1007/BF00352350 DO - 10.1007/BF00352350 ID - Thomsen1994 ER - TY - JOUR AU - Kumar, S. AU - Hedges, S. B. PY - 1998 DA - 1998// TI - A molecular timescale for vertebrate evolution JO - Nature VL - 392 UR - https://doi.org/10.1038/31927 DO - 10.1038/31927 ID - Kumar1998 ER - TY - JOUR AU - Birtle, Z. AU - Goodstadt, L. AU - Ponting, C. PY - 2005 DA - 2005// TI - Duplication and positive selection among hominin-specific PRAME genes JO - BMC genomics VL - 6 UR - https://doi.org/10.1186/1471-2164-6-120 DO - 10.1186/1471-2164-6-120 ID - Birtle2005 ER - TY - JOUR AU - Saxena, R. AU - Brown, L. G. AU - Hawkins, T. AU - Alagappan, R. K. AU - Skaletsky, H. AU - Reeve, M. P. AU - Reijo, R. AU - Rozen, S. AU - Dinulos, M. B. AU - Disteche, C. M. PY - 1996 DA - 1996// TI - The DAZ gene cluster on the human Y chromosome arose from an autosomal gene that was transposed, repeatedly amplified and pruned JO - Nat Genet VL - 14 UR - https://doi.org/10.1038/ng1196-292 DO - 10.1038/ng1196-292 ID - Saxena1996 ER - TY - JOUR AU - Lahn, B. T. AU - Page, D. C. PY - 1999 DA - 1999// TI - Retroposition of autosomal mRNA yielded testis-specific gene family on human Y chromosome JO - Nature Genetics VL - 21 UR - https://doi.org/10.1038/7771 DO - 10.1038/7771 ID - Lahn1999 ER - TY - JOUR AU - Linardopoulou, E. V. AU - Williams, E. M. AU - Fan, Y. AU - Friedman, C. AU - Young, J. M. AU - Trask, B. J. PY - 2005 DA - 2005// TI - Human subtelomeres are hot spots of interchromosomal recombination and segmental duplication JO - Nature VL - 437 UR - https://doi.org/10.1038/nature04029 DO - 10.1038/nature04029 ID - Linardopoulou2005 ER - TY - JOUR AU - Nei, M. AU - Gu, X. AU - Sitnikova, T. PY - 1997 DA - 1997// TI - Evolution by the birth-and-death process in multigene families of the vertebrate immune system JO - Proceedings of the National Academy of Sciences of the United States of America VL - 94 UR - https://doi.org/10.1073/pnas.94.15.7799 DO - 10.1073/pnas.94.15.7799 ID - Nei1997 ER - TY - JOUR AU - Roldan, G. o. m. e. n. d. i. o. PY - 1999 DA - 1999// TI - The Y chromosome as a battle ground for sexual selection JO - Trends in ecology & evolution (Personal edition) VL - 14 UR - https://doi.org/10.1016/S0169-5347(98)01567-5 DO - 10.1016/S0169-5347(98)01567-5 ID - Roldan1999 ER - TY - JOUR AU - Rozen, S. AU - Skaletsky, H. AU - Marszalek, J. D. AU - Minx, P. J. AU - Cordum, H. S. AU - Waterston, R. H. AU - Wilson, R. K. AU - Page, D. C. PY - 2003 DA - 2003// TI - Abundant gene conversion between arms of palindromes in human and ape Y chromosomes JO - Nature VL - 423 UR - https://doi.org/10.1038/nature01723 DO - 10.1038/nature01723 ID - Rozen2003 ER - TY - JOUR AU - Nickkholgh, B. AU - Noordam, M. J. AU - Hovingh, S. E. AU - van Pelt, A. M. AU - van der Veen, F. AU - Repping, S. PY - 2010 DA - 2010// TI - Y chromosome TSPY copy numbers and semen quality JO - Fertil Steril VL - 94 UR - https://doi.org/10.1016/j.fertnstert.2009.09.051 DO - 10.1016/j.fertnstert.2009.09.051 ID - Nickkholgh2010 ER - TY - JOUR AU - Jakubiczka, S. AU - Schnieders, F. AU - Schmidtke, J. PY - 1993 DA - 1993// TI - A bovine homologue of the human TSPY gene JO - Genomics VL - 17 UR - https://doi.org/10.1006/geno.1993.1394 DO - 10.1006/geno.1993.1394 ID - Jakubiczka1993 ER - TY - JOUR AU - Verkaar, E. L. AU - Zijlstra, C. AU - van 't Veld, E. M. AU - Boutaga, K. AU - van Boxtel, D. C. AU - Lenstra, J. A. PY - 2004 DA - 2004// TI - Organization and concerted evolution of the ampliconic Y-chromosomal TSPY genes from cattle JO - Genomics VL - 84 UR - https://doi.org/10.1016/j.ygeno.2004.05.001 DO - 10.1016/j.ygeno.2004.05.001 ID - Verkaar2004 ER - TY - JOUR AU - Hamilton, C. K. AU - Favetta, L. A. AU - Di Meo, G. P. AU - Floriot, S. AU - Perucatti, A. AU - Peippo, J. AU - Kantanen, J. AU - Eggen, A. AU - Iannuzzi, L. AU - King, W. A. PY - 2009 DA - 2009// TI - Copy number variation of testis-specific protein, Y-encoded (TSPY) in 14 different breeds of cattle (Bos taurus) JO - Sex Dev VL - 3 UR - https://doi.org/10.1159/000228721 DO - 10.1159/000228721 ID - Hamilton2009 ER - TY - JOUR AU - Vodicka, R. AU - Vrtel, R. AU - Dusek, L. AU - Singh, A. R. AU - Krizova, K. AU - Svacinova, V. AU - Horinova, V. AU - Dostal, J. AU - Oborna, I. AU - Brezinova, J. PY - 2007 DA - 2007// TI - TSPY gene copy number as a potential new risk factor for male infertility JO - Reprod Biomed Online VL - 14 UR - https://doi.org/10.1016/S1472-6483(10)61049-8 DO - 10.1016/S1472-6483(10)61049-8 ID - Vodicka2007 ER - TY - JOUR AU - Giachini, C. AU - Nuti, F. AU - Turner, D. J. AU - Laface, I. AU - Xue, Y. AU - Daguin, F. AU - Forti, G. AU - Tyler-Smith, C. AU - Krausz, C. PY - 2009 DA - 2009// TI - TSPY1 copy number variation influences spermatogenesis and shows differences among Y lineages JO - J Clin Endocrinol Metab VL - 94 UR - https://doi.org/10.1210/jc.2009-1029 DO - 10.1210/jc.2009-1029 ID - Giachini2009 ER - TY - JOUR AU - Laity, J. H. AU - Lee, B. M. AU - Wright, P. E. PY - 2001 DA - 2001// TI - Zinc finger proteins: new insights into structural and functional diversity JO - Current opinion in structural biology VL - 11 UR - https://doi.org/10.1016/S0959-440X(00)00167-6 DO - 10.1016/S0959-440X(00)00167-6 ID - Laity2001 ER - TY - JOUR AU - Modolell, J. AU - Bender, W. AU - Meselson, M. PY - 1983 DA - 1983// TI - Drosophila melanogaster mutations suppressible by the suppressor of Hairy-wing are insertions of a 7.3-kilobase mobile element JO - Proceedings of the National Academy of Sciences of the United States of America VL - 80 UR - https://doi.org/10.1073/pnas.80.6.1678 DO - 10.1073/pnas.80.6.1678 ID - Modolell1983 ER - TY - JOUR AU - Adryan, B. AU - Woerfel, G. AU - Birch-Machin, I. AU - Gao, S. AU - Quick, M. AU - Meadows, L. AU - Russell, S. AU - White, R. PY - 2007 DA - 2007// TI - Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila JO - Genome Biol VL - 8 UR - https://doi.org/10.1186/gb-2007-8-8-r167 DO - 10.1186/gb-2007-8-8-r167 ID - Adryan2007 ER - TY - JOUR AU - Gunn, S. R. AU - Bolla, A. R. AU - Barron, L. L. AU - Gorre, M. E. AU - Mohammed, M. S. AU - Bahler, D. W. AU - Mellink, C. H. M. AU - van Oers, M. H. J. AU - Keating, M. J. AU - Ferrajoli, A. PY - 2009 DA - 2009// TI - Array CGH analysis of chronic lymphocytic leukemia reveals frequent cryptic monoallelic and biallelic deletions of chromosome 22q11 that include the PRAME gene JO - Leukemia research VL - 33 UR - https://doi.org/10.1016/j.leukres.2008.10.010 DO - 10.1016/j.leukres.2008.10.010 ID - Gunn2009 ER - TY - JOUR AU - Isahakia, M. A. PY - 1988 DA - 1988// TI - Characterization of baboon testicular antigens using monoclonal anti-sperm antibodies JO - Biol Reprod VL - 39 UR - https://doi.org/10.1095/biolreprod39.4.889 DO - 10.1095/biolreprod39.4.889 ID - Isahakia1988 ER - TY - JOUR AU - Conway, S. J. AU - Mahadevaiah, S. K. AU - Darling, S. M. AU - Capel, B. AU - Rattigan, A. M. AU - Burgoyne, P. S. PY - 1994 DA - 1994// TI - Y353/B: a candidate multiple-copy spermiogenesis gene on the mouse Y chromosome JO - Mamm Genome VL - 5 UR - https://doi.org/10.1007/BF00360546 DO - 10.1007/BF00360546 ID - Conway1994 ER - TY - JOUR AU - Toure, A. AU - Grigoriev, V. AU - Mahadevaiah, S. K. AU - Rattigan, A. AU - Ojarikre, O. A. AU - Burgoyne, P. S. PY - 2004 DA - 2004// TI - A protein encoded by a member of the multicopy Ssty gene family located on the long arm of the mouse Y chromosome is expressed during sperm development JO - Genomics VL - 83 UR - https://doi.org/10.1016/S0888-7543(03)00216-7 DO - 10.1016/S0888-7543(03)00216-7 ID - Toure2004 ER - TY - JOUR AU - Lee, T. -. L. AU - Pang, A. L. -. Y. AU - Rennert, O. M. AU - Chan, W. -. Y. PY - 2009 DA - 2009// TI - Genomic landscape of developing male germ cells JO - Birth Defects Research Part C, Embryo Today: Reviews VL - 87 UR - https://doi.org/10.1002/bdrc.20147 DO - 10.1002/bdrc.20147 ID - Lee2009 ER - TY - JOUR AU - Liu, W. -. S. AU - Wang, A. AU - Yang, Y. AU - Chang, T. -. C. AU - Landrito, E. AU - Yasue, H. PY - 2009 DA - 2009// TI - Molecular Characterization of the DDX3Y Gene and Its Homologs in Cattle JO - Cytogenetic and Genome Res VL - 126 UR - https://doi.org/10.1159/000266168 DO - 10.1159/000266168 ID - Liu2009 ER - TY - CHAP AU - Sambrook, J. AU - Russell, D. W. PY - 2001 DA - 2001// BT - Molecular Cloning ID - Sambrook2001 ER - TY - JOUR AU - Liu, W. -. S. AU - Mariani, P. AU - Beattie, C. W. AU - Alexander, L. J. AU - Ponce De León, F. A. PY - 2002 DA - 2002// TI - A radiation hybrid map for the bovine Y Chromosome JO - Mamm Genome VL - 13 UR - https://doi.org/10.1007/s00335-001-2133-8 DO - 10.1007/s00335-001-2133-8 ID - Liu2002 ER - TY - JOUR AU - Kiuchi, S. AU - Yamada, T. AU - Kiyokawa, N. AU - Saito, T. AU - Fujimoto, J. AU - Yasue, H. PY - 2006 DA - 2006// TI - Genomic structure of swine taste receptor family 1 member 3, TAS1R3, and its expression in tissues JO - Cytogenetic and genome research VL - 115 UR - https://doi.org/10.1159/000094801 DO - 10.1159/000094801 ID - Kiuchi2006 ER - TY - JOUR AU - Ohtsuki, T. AU - Furuya, S. AU - Yamada, T. AU - Nomura, S. AU - Hata, J. AU - Yabe, Y. AU - Hosoda, Y. PY - 1998 DA - 1998// TI - Gene expression of noncollagenous bone matrix proteins in the limb joints and intervertebral disks of the twy mouse JO - Calcified tissue international VL - 63 UR - https://doi.org/10.1007/s002239900509 DO - 10.1007/s002239900509 ID - Ohtsuki1998 ER - TY - STD TI - Wu TD, Nacu S: Fast and SNP-tolerant detection of complex variants and splicing in short reads. Bioinformatics. Oxford, England, 26 (7): 873-881. 10.1093/bioinformatics/btq057. ID - ref73 ER - TY - JOUR AU - Miller, N. A. AU - Kingsmore, S. F. AU - Farmer, A. AU - Langley, R. J. AU - Mudge, J. AU - Crow, J. A. AU - Gonzalez, A. J. AU - Schilkey, F. D. AU - Kim, R. J. AU - van Velkinburgh, J. PY - 2008 DA - 2008// TI - Management of High-Throughput DNA Sequencing Projects: Alpheus JO - Journal of computer science and systems biology VL - 1 ID - Miller2008 ER - TY - JOUR AU - Florea, L. AU - Hartzell, G. AU - Zhang, Z. AU - Rubin, G. M. AU - Miller, W. PY - 1998 DA - 1998// TI - A computer program for aligning a cDNA sequence with a genomic DNA sequence JO - Genome research VL - 8 ID - Florea1998 ER - TY - JOUR AU - Rice, P. AU - Longden, I. AU - Bleasby, A. PY - 2000 DA - 2000// TI - EMBOSS: the European Molecular Biology Open Software Suite JO - Trends in Genetics: TIG VL - 16 UR - https://doi.org/10.1016/S0168-9525(00)02024-2 DO - 10.1016/S0168-9525(00)02024-2 ID - Rice2000 ER - TY - JOUR AU - Tamura, K. AU - Dudley, J. AU - Nei, M. AU - Kumar, S. PY - 2007 DA - 2007// TI - MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0 JO - Molecular biology and evolution VL - 24 UR - https://doi.org/10.1093/molbev/msm092 DO - 10.1093/molbev/msm092 ID - Tamura2007 ER - TY - JOUR AU - Nei, M. AU - Gojobori, T. PY - 1986 DA - 1986// TI - Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions JO - Molecular biology and evolution VL - 3 ID - Nei1986 ER - TY - JOUR AU - Tamura, K. AU - Nei, M. AU - Kumar, S. PY - 2004 DA - 2004// TI - Prospects for inferring very large phylogenies by using the neighbor-joining method JO - Proc Natl Acad Sci USA VL - 101 UR - https://doi.org/10.1073/pnas.0404206101 DO - 10.1073/pnas.0404206101 ID - Tamura2004 ER - TY - CHAP AU - Smit, A. F. A. H. R. AU - Green, P. PY - 1996 DA - 1996// BT - RepeatMasker Open-3.0 ID - Smit1996 ER - TY - STD TI - Krumsiek J, Arnold R, Rattei T: Gepard: a rapid and sensitive tool for creating dotplots on genome scale. Bioinformatics. 2007, Oxford, England, 23 (8): 1026-1028. 10.1093/bioinformatics/btm039. ID - ref81 ER - TY - JOUR AU - Altschul, S. F. AU - Gish, W. AU - Miller, W. AU - Myers, E. W. AU - Lipman, D. J. PY - 1990 DA - 1990// TI - Basic local alignment search tool JO - Journal of Molecular Biology VL - 215 UR - https://doi.org/10.1016/S0022-2836(05)80360-2 DO - 10.1016/S0022-2836(05)80360-2 ID - Altschul1990 ER - TY - JOUR AU - Felsenstein, J. PY - 1985 DA - 1985// TI - Confidence Limits on Phylogenies: An Approach Using the Bootstrap JO - Evolution VL - 39 UR - https://doi.org/10.2307/2408678 DO - 10.2307/2408678 ID - Felsenstein1985 ER -