Skip to main content

Table 2 Significant KEGG identifiers detected based on the differentially expressed transcripts in cluster 2 for the acute phase response to E. col i infection*

From: In depth analysis of genes and pathways of the mammary gland involved in the pathogenesis of bovine Escherichia coli- mastitis

KEGG ID P value Odds Ratio Exp Count Count Size Term
830 0.00011 19.46957 0.257269 4 24 Retinol metabolism
71 0.002574 12.51056 0.278708 3 26 Fatty acid metabolism
1100 0.016481 2.126324 6.817621 13 636 Metabolic pathways
61 0.021326 93.55556 0.021439 1 2 Fatty acid biosynthesis
980 0.029004 8.222903 0.267988 2 25 Metabolism of xenobiotics by cytochrome P450
561 0.031206 7.879108 0.278708 2 26 Glycerolipid metabolism
982 0.035802 7.270856 0.300147 2 28 Drug metabolism - cytochrome P450
  1. *A hypergeometric gene set enrichment test was performed based on cluster 2 of the contrast T24 vs. C24. Overrepresentation of gene sets defined by the KEGG database was tested using the Fisher's exact test. A gene set was considered significant if P < 0.05.