Skip to main content

Table 1 Summary of sequence assembly after Illumina sequencing

From: Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds

  Sequences (n) Base pairs (Mbp) Mean length (bp) N50 (bp)
Raw sequencing reads 34,493,882 2,587.04 75 -
Clean reads 30,929,074 2,319.68 75 -
Contigs (≥100 bp) 191,376 39.72 208 225
Scaffold sequences (≥100 bp) 127,901 45.07 355 506
Singletons (≥100 bp) 126,306 - - -
Clusters (≥100 bp) 788 - - -
Total unigenes (≥100 bp) 127,094 45.07 355 506