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Table 1 Summary of sequence assembly after Illumina sequencing

From: Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds

 

Sequences (n)

Base pairs (Mbp)

Mean length (bp)

N50 (bp)

Raw sequencing reads

34,493,882

2,587.04

75

-

Clean reads

30,929,074

2,319.68

75

-

Contigs (≥100 bp)

191,376

39.72

208

225

Scaffold sequences (≥100 bp)

127,901

45.07

355

506

Singletons (≥100 bp)

126,306

-

-

-

Clusters (≥100 bp)

788

-

-

-

Total unigenes (≥100 bp)

127,094

45.07

355

506