Table 3 The 30 most frequently occurring InterPro domains/families in C. sinensis unigenes
Conserved domain/family | Accession ID | Sequences (n) | Rank |
|---|---|---|---|
Protein kinase, catalytic domain | IPR000719 | 1415 | 1 |
Serine/threonine-protein kinase-like domain | IPR017442 | 1017 | 2 |
Pentatricopeptide repeat | IPR002885 | 636 | 3 |
Serine/threonine-protein kinase domain | IPR002290 | 549 | 4 |
Leucine-rich repeat | IPR001611 | 475 | 5 |
Tyrosine-protein kinase, subgroup, catalytic domain | IPR020635 | 450 | 6 |
Cytochrome P450 | IPR001128 | 366 | 7 |
Tyrosine-protein kinase, catalytic domain | IPR001245 | 308 | 8 |
WD40-repeat-containing domain | IPR017986 | 284 | 9 |
Zinc finger, RING-type | IPR001841 | 278 | 10 |
WD40 repeat, subgroup | IPR019781 | 271 | 11 |
WD40 repeat 2 | IPR019782 | 260 | 12 |
UDP-glucuronosyl/UDP-glucosyltransferase | IPR002213 | 258 | 13 |
RNA recognition motif, RNP-1 | IPR000504 | 253 | 14 |
WD40 repeat | IPR001680 | 248 | 15 |
RNA-directed DNA polymerase (reverse transcriptase), related | IPR015706 | 243 | 16 |
Zinc finger, C3HC4 RING-type | IPR018957 | 237 | 17 |
ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter | IPR001757 | 228 | 18 |
Molecular chaperone, heat shock protein, Hsp40, DnaJ | IPR015609 | 181 | 19 |
Myb-type HTH DNA-binding domain | IPR017930 | 169 | 20 |
Cyclin-like F-box | IPR001810 | 164 | 21 |
Myb, DNA-binding | IPR014778 | 163 | 22 |
Ankyrin repeat-containing domain | IPR020683 | 153 | 23 |
EF-HAND 2 | IPR018249 | 152 | 24 |
Leucine-rich repeat, N-terminal | IPR013210 | 151 | 25 |
Tetratricopeptide region | IPR013026 | 145 | 26 |
Protein phosphatase 2C | IPR015655 | 145 | 26 |
NB-ARC | IPR002182 | 143 | 27 |
Myb transcription factor | IPR015495 | 130 | 28 |
Peptidase S8, subtilisin-related | IPR015500 | 130 | 28 |
Ankyrin repeat | IPR002110 | 130 | 28 |
Mitochondrial substrate carrier | IPR001993 | 130 | 28 |
ATPase, AAA-type, core | IPR003959 | 128 | 29 |
Mitochondrial substrate/solute carrier | IPR018108 | 122 | 30 |