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Table 1 General sequencing and combined (454 and solexa) de novo assembly features of draft genomes of Xv, Xp and Xg.

From: Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper

 

Xanthomonas vesicatoria(Xv)

Xanthomonas perforans(Xp)

Xanthomonas gardneri(Xg)

Number of contigs

296

291

552

N50*

37

40

83

Mean contig length

18,686

18,082

10,014

Longest contig

153,834

133,836

88,536

Total length of contigs

5,531,090

5,262,127

5,528,125

  1. *N50 - number of contigs that cover 50% of the genome assembly.
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BMC Genomics

ISSN: 1471-2164

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