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Table 5 Copy number of the four cis-elements identified in the upstream regions of 55 commonly induced genes

From: Genome-wide temporal-spatial gene expression profiling of drought responsiveness in rice

No Gene ID Annotation S1 S2 S3 S4
1 Os08g0104400 expressed protein 1    
2 Os01g0705200 late embryogenesis abundant protein 3 8 3 4  
3 Os12g0478200 ABA-responsive protein 2    
4 Os03g0305600 expressed protein 3 1   
5 Os01g0225600 late embryogenesis abundant protein Lea14-A 2 1   
6 Os09g0109600 expressed protein 1    
7 Os05g0542500 late embryogenesis abundant protein 3 4 1   
8 Os11g0454300 water stress-inducible protein Rab21 8 3   1
9 Os02g0140800 expressed protein 1   1  
10 Os01g0214500 conserved hypothetical protein 5 2 2  
11 Os04g0266900 transketolase, chloroplast precursor 5 1 2  
12 Os01g0124400 Bowman-Birk type bran trypsin inhibitor precursor 1   1  
13 Os11g0582300 protein SEY1 7 1 1 1
14 Os07g0563400 fiber expressed protein, putative, expressed 7 5 2  
15 Os10g0548100 expressed protein 17 9 5 5
16 Os01g0226400 ATP binding protein, putative, expressed 8 7 3 2
17 Os06g0698300 protein phosphatase 2C 12 3   1
18 Os01g0867300 G-box-binding factor 4 4 2 3 1
19 Os01g0654400 seed maturation protein PM41 4 1 2  
20 Os10g0505900 expressed protein 5   1  
21 Os01g0743500 NADP-dependent malic enzyme 11 4 3 1
22 Os02g0649300 homeobox-leucine zipper protein ATHB-6 7 1 1  
23 Os01g0950900 HYP1 16 8 8 3
24 Os06g0324400 protein LEA25 1    
25 Os03g0133100 expressed protein 13 5 1 3
26 Os05g0572700 protein phosphatase 2C ABI1 21 9 3 2
27 Os11g0454200 dehydrin Rab16B 2 1 1  
28 Os12g0147200 expressed protein 7 3 2 2
29 Os03g0623100 expressed protein 4 3   
30 Os05g0373900 eukaryotic peptide chain release factor subunit 1-1 5 1   
31 Os11g0454000 dehydrin Rab16C 1    
32 Os08g0327700 seed maturation protein 5 2 1  
33 Os04g0610600 embryonic protein DC-8 10 4 3 2
34 Os06g0246500 pyruvate dehydrogenase E1 component alpha subunit 17 5 3 3
35 Os01g0844300 FK506-binding protein 4 4 2 1  
36 Os03g0723400 expressed protein 1    
37 Os06g0341300 late embryogenesis abundant protein D-34 7 1   
38 Os06g0681200 early nodulin 20 precursor 2 1   
39 Os08g0442900 fibroin heavy chain precursor 5 2 1  
40 Os05g0550600 nonspecific lipid-transfer protein AKCS9 precursor 14 4 5 1
41 Os03g0168100 embryonic protein DC-8 7 3 1  
42 Os03g0168000 expressed protein 9 5 2 1
43 Os04g0589800 seed maturation protein 6 5 2 3
44 Os01g0794400 protein disulfide isomerase, putative, expressed 2 1   1
45 Os06g0651200 expressed protein 6    
46 Os11g0453900 dehydrin Rab16D 9 3 1 1
47 Os01g0303300 stress-inducible membrane pore protein 13 1 1  
48 Os05g0468800 expressed protein 12 7 3 2
49 Os11g32890 expressed protein     
50 Os03g0277300 heat shock cognate 70 kDa protein     
51 Os05g0122700 expressed protein     
52 Os11g0181200 expressed protein     
53 Os11g43790 expressed protein     
54 Os03g0286900 expressed protein     
55 Os01g0743600 ATP-dependent peptidase     
  1. Note: Log2 transformed ratios of drought stress and control