Table 1 Genome features
Property | W22703 pYV- | Y. enterocolitica 8081[18] |
|---|---|---|
Size [bp] | <4,754,619 | 4,615,899 |
G + C content [%] | 46.9 | 47.3 |
Number of contigs >1000 bp | 305 | 2 (linear chromosome, plasmid pYV) |
Number of CDs | >4,003 | 4,037 |
Coding density [%] | 84.4 | 83.8 |
Average gene size | unknown | 968 |
rRNA operons | unknown | 7 |
tRNAs | ≥ 68 | 81 |
Common IS elements (numbers) | IS911A, ISRM3, IS1328 (3), IS1329, IS1400, IS1666, IS1667 (4), IS1668, IS1669 | |
IS elements not shared | IS2A/D/F/H/I/K; iso-IS1N; IS1328; IS911B | IS3, IS4, IS1111, IS1222, IS1330, IS1541, IS1660 (6), IS1664, IS1665 (6), IS1669 (4), IS1664 (2), IS1222, IS3, IS Sod4 |
Prophage regions | 2 | 4 |
Sequence coverage | 16-fold | 9-fold |