Subsystem annotation* | CDS count |
---|---|
Core genes | |
• none | 20,117 |
• Ribosome LSU bacterial | 558 |
• Teichoic and lipoteichoic acids biosynthesis | 385 |
• Heme, hemin uptake and utilization systems in Gram Positives | 358 |
• Glycerolipid and Glycerophospholipid Metabolism in Bacteria | 357 |
• DNA-replication | 357 |
• Conserved gene cluster associated with Met-tRNA formyltransferase | 357 |
• Ribosome SSU bacterial | 357 |
• Peptidoglycan Biosynthesis | 340 |
• tRNA modification E.coli | 339 |
• Adhesins in Staphylococcus | 320 |
• DNA repair, bacterial | 311 |
• Methionine Biosynthesis | 307 |
• tRNA aminoacylation | 289 |
• Embden-Meyerhof and Gluconeogenesis | 255 |
• Bacterial Cell Division | 255 |
• pyrimidine conversions | 244 |
• Translation factors bacterial | 242 |
• Other defined categories (206 additional RAST subsystems) | 14,724 |
Distributed genes | |
◦ none | 5,161 |
◦ Staphylococcal pathogenicity islands SaPI | 68 |
◦ ABC transporter oligopeptide (TC 3.A.1.5.1) | 62 |
◦ ESAT-6 proteins secretion system in Firmicutes | 60 |
◦ Methicillin resistance in Staphylococci | 47 |
◦ Adhesins in Staphylococcus | 39 |
◦ Restriction-Modification System | 33 |
◦ Cobalt-zinc-cadmium resistance | 31 |
◦ Potassium homeostasis | 27 |
◦ Teichoic and lipoteichoic acids biosynthesis | 22 |
◦ Aminoglycoside adenylyltransferases | 17 |
◦ Sex pheromones in Enterococcus faecalis and other Firmicutes | 16 |
◦ DNA repair, bacterial | 16 |
◦ tRNA modification E.coli | 16 |
◦ Nudix proteins (nucleoside triphosphate hydrolases) | 15 |
◦ Fosfomycin resistance | 14 |
◦ Tn552 | 14 |
◦ Glycerol and Glycerol-3-phosphate Uptake and Utilization | 12 |
◦ Peptidoglycan Biosynthesis | 12 |
◦ Other defined categories (15 additional RAST subsystems) | 60 |
Unique genes | |
❖ none | 130 |
❖ Restriction-Modification System | 3 |
❖ Streptothricin resistance | 1 |
❖ Teichoic and lipoteichoic acids biosynthesis | 1 |
❖ ABC transporter oligopeptide (TC 3.A.1.5.1) | 1 |
❖ Formaldehyde assimilation: Ribulose monophosphate pathway | 1 |
❖ Heme and Siroheme Biosynthesis | 1 |