Table 2 Comparison of genomes used in the simulation study
From: Assessing pooled BAC and whole genome shotgun strategies for assembly of complex genomes
Version Used for Statistics | Chrs | Scaffolds > 10Kbp | Genome Assembly Size | GC Content | Repeat Content | |
|---|---|---|---|---|---|---|
Arabidopsis thaliana | TAIR 9 | 5 | 5 | 119,146,348 | 35.97% | 16.51% |
Vitis vinifera | Genoscope 12X | 19 | 19 | 486,198,630 | 33.41% | 47.25% |
Populus trichocarpa | JGI v2 | 19 | 794 | 417,137,944 | 32.57% | 18.98% |
Oryza sativa | MSU v6.1 | 12 | 12 | 372,317,567 | 43.55% | 38.70% |
Sorghum bicolor | JGI sb1 | 10 | 19 | 738,540,932 | 41.49% | 63.12% |
Zea mays | MGP 4a.53 | 10 | 10 | 2,061,021,377 | 46.60% | 73.06% |