Skip to main content

Table 7 PANTHER gene ontology analysis on FBPA clustering of gene expression data in the bystander response

From: Time-series clustering of gene expression in irradiated and bystander fibroblasts: an application of FBPA clustering

Biological Process

Cluster

 

1

2

3

4

5

NF-kappaB cascade

NS

1.34 × 10-6

(6)

NS

4.74 × 10-3

(3)

NS

Ligand-mediated signaling

NS

1.72 × 10-6

(10)

NS

3.10 × 10-3

(5)

NS

Immunity and defense

NS

4.96 × 10-6

(14)

NS

1.24 × 10-2

(6)

NS

Cytokine and chemokine mediated signaling pathway

NS

6.82 × 10-6

(8)

NS

8.15 × 10-3

(4)

NS

Signal transduction

NS

1.86 × 10-5

(21)

2.51 × 10-3

(12)

NS

NS

Cell surface receptor mediated signal transduction

NS

3.13 × 10-4

(14)

4.45 × 10-3

(9)

NS

NS

Cell communication

NS

4.45 × 10-4

(12)

NS

3.70 × 10-2

(6)

NS

Cell proliferation and differentiation

NS

8.38 × 10-4

(10)

NS

NS

NS

Granulocyte-mediated immunity

NS

1.22 × 10-3

(4)

NS

2.73 × 10-5

(4)

NS

Macrophage-mediated immunity

NS

1.26 × 10-3

(5)

NS

2.57 × 10-2

(3)

NS

T-cell mediated immunity

NS

5.96 × 10-3

(5)

NS

NS

NS

Intracellular signaling cascade

NS

6.58 × 10-3

(9)

NS

NS

NS

Apoptosis

NS

1.86 × 10-2

(6)

NS

NS

NS

Inhibition of apoptosis

NS

NS

NS

1.98 × 10-2

(3)

NS

Calcium mediated signaling

NS

NS

NS

2.02 × 10-2

(3)

NS

Cell motility

NS

NS

NS

2.16 × 10-2

(4)

NS

  1. Significant PANTHER biological processes categories, p-values are Bonferroni corrected, p-values < 0.05 are shown. The number of genes in each category is shown in parentheses. NS is Not Significant.