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Table 2 Primers used in RT-PCR reaction to confirm microarray expression data.

From: Analysis of Gene expression in soybean (Glycine max) roots in response to the root knot nematode Meloidogyne incognita using microarrays and KEGG pathways

Name

Sequences (5'-3')

Product size (bp)

UBI-F

5-GTGTAATGTTGGATGTGTTCCC-3

107

UBI-R

5-ACACAATTGAGTTCAACACAAACCG-3

 

LOX1-F

5-ATGTTCACCCGTATCATGTTCA-3

100

LOX1-R

5-GGGTATCAAATCCAAGTTGGTG-3

 

AOS-F

5-CCGCATCCAAAAGTACCAGT-3

244

AOS-R

5-TTTGAGGAGGGAGTGTTTGG-3

 

AOC-F

5-TGCACGAGCAATTATTGTTGA-3

201

AOC-R

5-TTCGGTTTTACACATTAGCATTT-3

 

OPR2-F

5-GGTGCATCAACCTCAAACCT-63

218

OPR2-R

5-GTTGAGCCAAGATGGGACAT-3

 

OPR3-F

5-ACCGGTGCAGGTTCTTAATG-3

176

OPR3-R

5-GCCCACTTGTTTCTGCAAAT-3

 

PECT-F

5-CAAGAAACCCTCCCAACAAA-3

239

PECT-R

5-ACCACTCCATTCCATCCAAC-3

 

CELL-F

5-CTGCACAATTCCAGCTGTGT-3

207

CELL-R

5-GCGAAAAGGTGAGCAGAAAC-3

 

CCOA-OMT (12)-F

5-TTCCATATGTGGCAGGTGAA-3

222

CCOA-OMT (12)-R

5-TATGGAATGGGTCCGTGGT-3

 

CCOA-OMT (10)-F

5-CGCCTTGGAAATTGGTGTAT-3

232

CCOA-OMT (10)-R

5-GAAATCCAACGACCCCTTTT-3

 

C3H (12)-F

5-GCAGCCACTGTTTTCCTCTT-3

182

C3H (12)-R

5-ACCAGTGATGGGACTCCAAG-3

 

C3H (10)-F

5-GCAGGGACAGCGTTGATTAT-3

160

C3H (10)-R

5-TATCAGTGGGAGCTGCTGTG-3

 

F5H-F

5-AAATGTCATGCCTGGACACA-3

152

F5H-R

5-CATGGGCAATTGGAAGAGAT-3

 

CDKB2-F

5-CAGCCGTTGACAGACTTTGA-3

203

CDKB2-R

5-GGTGGACATTTGGTCCGTAG-3

 

CYCD3-F

5-AAATGCGACTGCCTTCTGTC3-

247

CYCD3-R

5-ACCAGATCCCTTTTCCACCT-3

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