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Table 5 Comparison of microarray and quantitative real-time-PCR (qRT-PCR) quantifications of gene expression.

From: Analysis of Gene expression in soybean (Glycine max) roots in response to the root knot nematode Meloidogyne incognita using microarrays and KEGG pathways

Gene Fold Change comparison for 12 dai Fold Change comparison for 10 wai
Jasmonic acid RT-PCR Microarray RT-PCR Microarray
LOX1 65.3 22.6 42.2 -9.9
AOS 0.0 -59.3 0.0 -77.4
AOC 0.1 -6.3 0.3 0
OPR2 9.1 5   
OPR3    0.1 -8.8
Cell Wall     
PECT. 49.4 47.5   
CELL. 1.0 -4.6   
CCOA-OMT12 25.0 2.6   
CCOA-OMT10    1.5 1.9
C3H12 2.7 2.9   
C3H10 0 0 9.4 8.4
F5H 78.6 15.4 88.9 20.5
Cell Cycle     
CDKB2 16.7 5.2 5.8 3.1
CYCD3 1.0 0 0.2 -2.9
  1. Note: Gray boxes refer to untested genes in a specific time point.