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Table 4 Examples of shrimp genes known to contain a very long stretch of microsatellites

From: Fosmid library end sequencing reveals a rarely known genome structure of marine shrimp Penaeus monodon

Gene [species]

Gene function

Sequence

Position

Role of microsatellites

Reference

PmAV [P. monodon]

Anti-virus

(GT) 46 [(AT)(GT)2]7....20 bp.....(AT)2(GT)2(AT)3(GT)3(AT)3(GT) 50

5'-promoter

Negative regulatory element

[15]

Prophenoloxidase-a [P. vannamei]

Innate immunity

(CT) 20

3'UTR

n.d.

[32]

Prophenoloxidase-b [P. vannamei]

Innate immunity

(CT) 38 ...12 bp...(CA) 14

3'UTR

n.d.

[33]

Heat shock cognate 70 [P. monodon]

Molecular chaperon;

immune and stress-related responses

(TA) 33 ...73 bp...(CA)9(TG)2(TA) 17

5'-promoter

n.d.

[66]

5-HT1 receptor [P. monodon]

Serotonin receptor; G-protein coupled

(GGC) 10

Coding region

poly(G) tract

[67]

  1. n.d.: not determined