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Table 2 Known and putative novel (putnov) SNVs and SNV densities in CTRL, DEFA and DEFB of NA12716 and NA12760 after successive filtering of HCDiffs

From: Comprehensive assessment of sequence variation within the copy number variable defensin cluster on 8p23 by target enriched in-depth 454 sequencing

  Total CTRL DEFA DEFB
  SNVs SNVs per kb known putnov SNVs per kb known putnov SNVs per kb known putnov SNVs per kb
NA12716 1.919 2,3 574 41 1,5 604 27 3,2 560 113 4,1
NA12760 2.265 2,7 595 48 1,5 428 37 2,4 979 178 7,0
unique SNVs 2.886   771 77   701 61   1.056 220  
    848   762   1.276  
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BMC Genomics

ISSN: 1471-2164

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