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Table 1 Protein products of genes classified as highly expressed (PHX) and moderately highly expressed (PX) according to codon usage.

From: Blueprint for a minimal photoautotrophic cell: conserved and variable genes in Synechococcus elongatus PCC 7942

Gen name*

length (bp)

Product

G+C desviation (SD)

N of HIP1 motifs

Synpcc7942_0260

824

ATPase

0

3

Synpcc7942_0442

497

ammonium transporter

0

1

Synpcc7942_0656

461

photosystem II 44 kDa subunit reaction center protein

0

0

Synpcc7942_0697

508

photosystem II core light harvesting protein

0

1

Synpcc7942_0885

694

elongation factor G

0

1

Synpcc7942_0977

333

Phosphoribulokinase

0

0

Synpcc7942_1096

456

thiamine biosynthesis protein ThiC

0

1

Synpcc7942_1231

324

apocytochrome f

0

0

Synpcc7942_2048

734

photosystem I P700 chlorophyll a apoprotein A2

0

2

Synpcc7942_2049

763

photosystem I P700 chlorophyll a apoprotein A1

0

1

Synpcc7942_2463

417

S-adenosylmethionine synthetase

0

0

Synpcc7942_2468

634

molecular chaperone DnaK

0

0

Synpcc7942_0143

326

pyruvate/2-oxoglutarate dehydrogenase (E1) component

0

0

Synpcc7942_0169

723

glutamate-ammonia ligase, glutamine synthetase type III

0

2

Synpcc7942_0282

427

serine hydroxymethyltransferase

0

1

Synpcc7942_0297

613

FtsH peptidase

0

2

Synpcc7942_0328

705

phycobilisome core-membrane linker polypeptide

0

1

Synpcc7942_0336

505

F0F1 ATP synthase subunit alpha

0

2

Synpcc7942_0385

457

geranylgeranyl reductase

0

2

Synpcc7942_0424

360

photosystem q(b) protein

0

0

Synpcc7942_0479

604

GTP-binding protein LepA

0

3

Synpcc7942_0538

668

Transketolase

0

3

Synpcc7942_0645

453

glutamate-1-semialdehyde aminotransferase

0

1

Synpcc7942_0685

555

chaperonin GroEL

0

2

Synpcc7942_0694

307

30S ribosomal protein S1

0

0

Synpcc7942_0734

624

hypothetical protein

0

2

Synpcc7942_0884

409

elongation factor Tu

0

1

Synpcc7942_0942

630

FtsH peptidase

0

1

Synpcc7942_0978

403

ferredoxin-NADP oxidoreductase

0

0

Synpcc7942_1426

472

ribulose bisophosphate carboxylase

0

2

Synpcc7942_1439

533

NAD(P)H-quinone oxidoreductase subunit 4

0

0

Synpcc7942_1443

357

fructose-1,6-bisphosphate aldolase

0

0

Synpcc7942_1463

543

Porin

0

1

Synpcc7942_1464

531

Porin

0

0

Synpcc7942_1522

1100

DNA-directed RNA polymerase subunit beta

0

1

Synpcc7942_1523

624

DNA-directed RNA polymerase subunit gamma

0

0

Synpcc7942_1524

1318

DNA-directed RNA polymerase subunit beta'

0

4

Synpcc7942_1525

597

GTP-binding protein TypA

0

1

Synpcc7942_1607

518

porin; major outer membrane protein

0

1

Synpcc7942_1719

475

isocitrate dehydrogenase

0

2

Synpcc7942_1782

430

threonine synthase

0

1

Synpcc7942_1907

358

magnesium-protoporphyrin IX monomethyl ester cyclase

0

0

Synpcc7942_2091

612

NAD(P)H-quinone oxidoreductase subunit F

0

5

Synpcc7942_2093

430

CO2 hydration protein

0

1

Synpcc7942_2156

473

L-glutamine synthetase

0

1

Synpcc7942_2160

384

alanine-glyoxylate aminotransferase

0

0

Synpcc7942_2313

544

chaperonin GroEL

0

1

Synpcc7942_2315

484

F0F1 ATP synthase subunit beta

0

1

Synpcc7942_2444

337

phosphate binding protein

0

0

Synpcc7942_2524

474

trigger factor

0

2

  1. *PHX genes are shown in black, PX otherwise.