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Table 1 Results from the promoter analysis

From: The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation

  

SYGGRG ... CYCCRS

  

CYCCRS ... SYGGRG

  

SYGGRG ... SYGGRG

 

SYGGRG

  

SAGGGRGR

  

20 bp distance

50 bp distance

Average number per gene in whole genome

4.13

0.47

0.9

0.57

 

A

-8%

- 66%**

-24%

-17%

 

B

- 3%

- 2%

- 7%

17%

 

C

26%

33%

11%

34%

Enrichment in clusters

D

+23%**

36%

+48%**

+105%**

 

E

+16%**

+58%*

26%

+72%**

 

F

- 3%

9%

11%

-15%

 

G

1%

- 43%*

- 6%

-26%

 

H

1%

+23%*

3%

8%

 

X

-16%

- 50%**

-28%

24%

  1. Enrichments compared to whole genome values are shown.
  2. Results of statistical tests (Student t-test) are indicated as follow:
  3. * p-value between 0.05 and 0.1;
  4. ** p-value < 0.05. Values in bold are significant positive enrichments, which are predominantly discussed in the text.