Skip to main content

Table 1 HCNE density comparison

From: Genomic features and computational identification of human microRNAs under long-range developmental regulation

 

Comparison between human conserved ST miRNAs and human random coding regions

Comparison between human conserved ST miRNAs and human random non-coding regions

Comparison between human conserved ST miRNAs and human GRB target genes

Lineage comparison

p -value (all regions)

p -value (excluding regions overlapping GRBs)

p -value (all regions)

p -value (excluding regions overlapping GRBs)

p -value (all regions)

p -value (excluding conserved human ST miRNAs overlapping GRBs)

human: mouse

0

0

0

0

0

0

human: dog

0

0

0

0

0

0

human: opossum

0

0

1.0e-04

0

0

0

human: platypus

0

0

0

2.0e-04

0

0

human: chicken

0

0

0

0

0

0

human: frog

0

0

0

0

0

0

human: zebrafish

4.0e-03

8.0e-03

1.8e-03

4.0e-04

0

0

  1. The comparisons represented by each column were performed after selecting HCNEs and ST miRNAs conserved between the lineages shown in the left column (see Methods). The p-values were computed using the two-sided bootstrapped version of the Kolmogorov-Smirnov test. All p-values lower than 1.0e-20 were set to 0.