| |
Overall Totals
|
Weighted Mapped Read Counts
| |
Gene Expression Summary
| | |
|---|
|
tissue type
|
reads
|
mapped reads (%)
|
transcriptome v3.6 (%)
|
nuclear gnm.
|
mito. gnm.
|
Gene Count
|
median RPKM
|
mean RPKM
|
std.dev. RPKM
|
|---|
|
female bodies
|
27877821
|
25358733 (90.96)
|
16606092 (59.57)
|
14680019
|
263602
|
12145
|
8.87
|
59.74
|
543.15
|
|
female antennae
|
25980364
|
24123025 (92.85)
|
14617276 (56.26)
|
15280026
|
80727
|
11722
|
9.38
|
59.22
|
732.65
|
|
female palps
|
27449612
|
25984839 (94.66)
|
15293125 (55.71)
|
16700334
|
420897
|
12297
|
10.37
|
56.44
|
496.05
|
|
male bodies
|
31876060
|
30226447 (94.82)
|
17603111 (55.22)
|
16016349
|
2408310
|
12253
|
8.34
|
54.01
|
424.05
|
|
male antennae
|
33950770
|
32144101 (94.68)
|
18231088 (53.70)
|
21427148
|
241273
|
11986
|
10.34
|
46.01
|
229.14
|
|
male palps
|
35705184
|
33339629 (93.37)
|
22596709 (63.29)
|
17625684
|
536952
|
12146
|
8.40
|
49.14
|
286.49
|
- Cells in each row contain information corresponding to the tissue type listed. Overall Totals: Reads: total number of short reads generated from each sample. Mapped reads: the number (and percentage) of total reads that were mapped to the transcriptome, nuclear genome, and/or the mitochondrial genome. Weighted Mapped Read Counts: Transcriptome v3.6: the number (and percentage) of reads mapped to version 3.6 of the An. gambiae transcriptome. Nuclear gnm.: the number the number of reads mapped to the assembled An. gambiae genome. Mito. gnm.: the number reads mapped to the An. gambiae mitochondrial genome. Gene Expression Summary: Gene count: the total number of annotated genes in each tissue type having an RPKM (R eads P er K ilobase per M illion) greater than zero. Mean, median and std. deviation of the RPKM values for each tissue type.
