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Table 1 List of most highly induced genes upon L-cysteine deprivation

From: Global analysis of gene expression in response to L-Cysteine deprivation in the anaerobic protozoan parasite Entamoeba histolytica

Probe set ID

Accession numbers

Common Names

Basal Expression (log2)

3 h

6 h

12 h

24 h

48 h

p value

EHI_173950_at

XM_647419

Major facilitator superfamily (MFS) transporter

6.11

+ 4.1

+ 14.6

+ 10.0

+ 4.7

+ 2.6

3.0E-07

EHI_138480_at

XM_650038

Iron-sulfur flavoprotein, putative

8.40

+ 3.6

+ 6.8

+ 9.8

+ 5.4

+ 4.2

4.5E-08

EHI_025710_at

XM_644279

Iron-sulfur flavoprotein, putative

7.17

+ 3.6

+ 5.4

+ 8.7

+ 5.2

+ 3.9

1.0E-06

13.m00350_at

XM_651312

Hypothetical protein

2.73

- 1.0

+ 2.4

+ 7.8

+ 5.4

+ 6.5

2.4E-04

EHI_176810_at

XM_644746

Hypothetical protein

3.53

+ 4.8

+ 8.8

+ 6.0

+ 1.2

- 1.3

4.6E-04

EHI_130490_at

XM_643338

Hypothetical protein

7.42

+ 1.7

+ 1.9

+ 5.8

+ 3.5

+ 1.7

1.8E-05

EHI_091050_at

XM_645468

Zinc finger protein, putative (IBR superfamily)

5.39

+ 2.9

+ 9.1

+ 5.7

- 1.4

- 1.7

1.3E-06

EHI_080280_at

XM_644430

Glu6-phosphate N-acetyltransferase. putative

3.79

+ 8.6

+ 6.2

+ 5.5

+ 1.3

- 1.3

3.3E-05

EHI_032670_s_at

XM_645799

Iron sulfur flavoprotein like, putative

7.47

+ 1.5

+ 3.5

+ 5.4

+ 3.9

+ 4.0

3.4E-06

870.m00013_x_at

XM_642792

Hypothetical protein

2.54

+ 3.4

+ 6.4

+ 5.0

+ 1.3

+ 1.9

6.5E-04

EHI_096770_at

XM_650580

Acetyltransferase, putative

7.01

+ 1.9

+ 3.4

+ 4.8

+ 3.7

+ 4.2

4.9E-05

EHI_137260_at

XM_647486

Hypothetical protein

2.97

+ 3.7

+ 4.4

+ 4.8

+ 2.4

+ 2.6

2.0E-03

65.m00145_x_at

XM_648920

Hypothetical protein

3.08

+ 1.2

+ 3.3

+ 4.7

+ 1.1

- 1.6

6.1E-06

EHI_062300_at

XM_645096

Hypothetical protein

4.10

+ 1.7

+ 1.9

+ 4.7

+ 2.7

+ 2.1

1.7E-03

337.m00049_x_at

XM_644075

Hypothetical protein

2.48

+ 2.9

+ 5.2

+ 4.5

+ 1.7

+ 1.0

1.5E-03

EHI_148740_at

XM_001913345

Hypothetical protein

8.19

+ 1.9

+ 2.7

+ 4.4

+ 1.7

+ 1.3

1.0E-06

79.m00141_x_at

XM_648476

Hypothetical protein

2.90

+ 2.0

+ 3.1

+ 4.4

+ 1.7

+ 1.2

2.4E-02

EHI_189190_x_at

XM_644225

Hypothetical protein

3.25

+ 1.7

+ 4.8

+ 4.4

- 1.0

- 1.9

4.3E-05

EHI_039720_at

XM_642957

Hypothetical protein

2.53

- 1.0

+ 2.1

+ 4.4

+ 3.3

+ 1.4

1.6E-05

EHI_051040_s_at

XM_647890

Hypothetical protein

6.82

+ 1.5

+ 2.7

+ 4.4

+ 2.5

+ 2.8

1.9E-03

EHI_139080_at

XM_643428

Longevity-assurance family protein

5.38

- 2.3

+ 1.2

+ 4.4

+ 2.3

+ 2.0

4.4E-06

EHI_067230_x_at

XM_647567

Hypothetical protein

6.18

+ 9.7

+ 13.6

+ 4.2

- 1.3

- 1.1

1.4E-07

EHI_055680_at

XM_646949

Heat shock protein, Hsp20 family, putative

5.63

+ 2.0

+ 4.6

+ 4.2

+ 1.6

+ 1.2

1.4E-03

EHI_086500_s_at

XM_646060

Short chain dehydrogenase

4.86

+ 6.1

+ 8.1

+ 4.2

+ 1.1

- 1.4

1.2E-04

EHI_148970_s_at

XM_652477

Regulator of nonsense transcripts, putative

9.86

+ 5.9

- 1.0

- 4.1

- 5.1

- 9.7

1.5E-07

EHI_139090_at

XM_643429

Hypothetical protein

5.95

+ 1.6

+ 1.9

+ 4.1

+ 1.3

- 1.5

6.2E-05

167.m00129_at

XM_646319

Hypothetical protein

3.36

+ 2.4

+ 4.8

+ 4.0

+ 2.0

+ 1.9

1.6E-03

EHI_110840_s_at

XM_649191

Regulator of nonsense transcripts, putative

9.73

+ 6.5

+ 1.0

- 4.0

- 4.6

- 8.7

1.2E-07

EHI_178130_at

XM_646412

Hypothetical protein

5.09

+ 2.0

+ 3.2

+ 4.0

+ 2.4

+ 2.8

5.9E-05

EHI_110370_at

XM_651955

Hypothetical protein

4.52

- 1.3

+ 1.3

+ 3.9

+ 2.6

+ 4.1

2.0E-04

EHI_070810_x_at

XM_649317

Regulator of nonsense transcripts, putative

4.76

+ 7.4

- 1.1

- 3.9

- 4.3

- 4.8

1.6E-05

EHI_004990_at

XM_647768

Ankyrin, putative

6.30

+ 2.0

+ 4.3

+ 3.8

+ 2.4

+ 3.0

5.1E-05

EHI_023330_at

XM_650547

Hypothetical protein

9.16

+ 6.5

+ 1.4

- 3.6

- 7.1

- 8.3

8.2E-07

EHI_005160_s_at

XM_647757

Hypothetical protein

2.94

+ 2.9

+ 4.5

+ 3.4

+ 1.6

+ 1.2

6.7E-03

EHI_028940_at

XM_647571

Hypothetical protein

8.44

+ 6.1

+ 6.5

+ 3.4

- 1.0

- 1.2

1.4E-07

EHI_033240_x_at

XM_645809

Riboflavin kinase/FAD synthetase, putative

6.61

+ 1.4

+ 4.6

+ 3.4

+ 3.0

+ 2.6

8.6E-07

493.m00030_x_at

XM_643175

Hypothetical protein

8.73

+ 3.9

+ 5.2

+ 3.3

- 1.8

- 1.9

1.4E-07

15.m00356_at

XM_651173

Hypothetical protein

7.03

+ 3.4

+ 4.2

+ 3.3

+ 1.7

+ 2.1

1.8E-03

EHI_110480_at

XM_651901

Hypothetical protein

4.51

+ 2.3

+ 4.2

+ 3.3

+ 2.9

+ 1.7

1.5E-04

EHI_140620_x_at

XM_645555

Hypothetical protein

2.32

+ 2.1

+ 5.9

+ 3.2

+ 1.3

+ 1.2

2.3E-02

EHI_136430_at

XM_650171

Hypothetical protein

4.08

+ 7.5

+ 7.8

+ 3.2

- 2.3

+ 1.0

4.1E-06

373.m00052_s_at

XM_643804

Hypothetical protein

6.53

+ 4.1

+ 2.0

+ 3.1

+ 1.0

- 1.1

7.9E-04

EHI_141030_at

XM_649510

DNA methyltransferase, putative

5.97

+ 2.4

+ 1.7

+ 2.3

+ 3.9

+ 4.1

3.6E-05

EHI_178520_at

XM_647939

Regulator of nonsense transcripts, putative

6.30

+ 6.2

- 1.4

- 2.1

- 1.9

- 1.4

8.7E-06

EHI_142270_at

XM_648119

Hypothetical protein

8.27

+ 3.7

+ 4.1

+ 2.0

- 1.0

- 1.1

2.9E-04

EHI_014340_at

XM_649988

Hypothetical protein

6.45

+ 2.7

+ 5.2

+ 1.9

+ 1.1

- 1.1

4.9E-05

EHI_064440_at

XM_648922

Hypothetical protein

5.03

- 1.5

- 1.2

+ 1.7

+ 2.5

+ 4.0

2.0E-03

EHI_120930_s_at

XM_649257

Protein kinase domain containing protein

2.61

+ 6.8

- 1.0

+ 1.5

+ 2.3

+ 1.8

2.4E-03

637.m00013_s_at

XM_642916

Regulator of nonsense transcripts, putative

2.92

+ 6.6

- 1.2

- 1.5

- 1.5

- 1.1

3.6E-05

EHI_031640_at

XM_648447

Hypothetical protein

6.98

+ 2.3

- 3.1

+ 1.5

+ 3.6

+ 5.8

1.8E-06

EHI_103640_at

XM_643960

Protein kinase domain containing protein

3.10

+ 5.2

- 1.0

- 1.4

+ 1.4

+ 1.2

5.6E-04

EHI_014910_s_at

XM_001914428

Hypothetical protein

2.99

+ 6.0

+ 1.5

- 1.3

+ 1.4

- 1.2

2.7E-04

EHI_038910_at

XM_651787

Hypothetical protein

2.57

+ 5.3

+ 2.3

+ 1.2

+ 1.6

- 1.0

5.1E-03

EHI_190460_at

XM_646352

Amino acid transporter, putative

3.11

- 1.2

- 1.4

+ 1.2

+ 2.2

+ 3.9

2.9E-03

EHI_084710_at

XM_650002

Hypothetical protein

4.27

+ 5.3

+ 2.3

+ 1.1

+ 2.2

+ 1.2

5.1E-04

EHI_054680_at

XM_646972

Hypothetical protein

3.09

- 1.2

- 1.4

- 1.1

+ 2.7

+ 5.9

4.8E-04

50.m00196_s_at

XM_649450

Hypothetical protein

4.95

+ 4.2

- 1.5

- 1.1

+ 1.2

- 1.4

9.0E-05

EHI_046040_s_at

XM_645992

Hypothetical protein

5.08

+ 6.5

+ 1.5

- 1.1

- 1.0

- 1.6

1.1E-05

  1. The probe set IDs, accession numbers, common names, basal expressions, fold changes, and p values of most highly induced genes upon L-cysteine deprivation are shown.