Skip to main content

Table 1 Novel miRNAs identified in rESCs

From: MicroRNA profiling of rhesus macaque embryonic stem cells

Mature miRNA sequence

MiRNA precursor location

Name

Reads

   

IVF1.2

IVF3.2

IVF3.3

TATGGAGGTCTCTGTCTGGCT

chr1:205,580,537-205,580,616:-

miR-1843-5p

124

159

152

TCTGATCGTTCCCCTCCATACA

chr1:205,580,537-205,580,616:-

miR-1843-3p

127

174

193

TGATGGGTGAATTTGTAGAAGG

chr1:70,976,129-70,976,208:-

miR-1262-3p

2,557

2,267

2,150

GTTGGGACAAGAGAACGGTCTT

chr1:158,332,926-158,333,000:-

miR-3122-5p

252

371

214

AATTCCCTTATGGATAATCTGG

chr2:80519804-80519882:+

miR-3938-3p

138

227

104

CATGCTAGAACAGAAAGAATGGG

chr3:106,443,245-106,443,327:+

miR-3146-3p

37

120

61

TATTTTGAGTGTTTGGAATTGA

chr4:125,407,861-125,407,939:+

miR-3145-3p

35

36

31

GAAAATGATGAGTAGTGACTGATG

chr4:128869861-128869951:+

miR-3622-3p

72

243

73

AAGAGCTTTTGGGAATTCAGGTAG

chr5:144,708,317-144,708,405:-

miR-3140-3p

151

358

200

ATATACAGGGGGAGACTCTTAT

chr7:164,327,476-164,327,555:+

chr7:164,328,696-164,328,775:+

miR-1185-3p

52

176

105

CGGGAACGTCGAGACTGGAGC

chr7:164,844,819-164,844,896:-

miR-1247-3p

127

131

32

TTAGGGCCCTGGCTCCATCTCC

chr9:73,887,081-73,887,164:+

miR-1296-5p

33

123

53

TCGACCGGACCTCGACCGGCTCG

chr9:103,084,702-103,084,783:-

miR-1307-5p

291

872

944

ACTCGGCGTGGCGTCGGTCGTGG

chr9:103,084,702-103,084,783:-

miR-1307-3p

1,936

3,975

3,030

GACTCTAGCTGCCAAAGGCGCT

chr11:98,713,141-98,713,223:+

miR-1251-5p

40

97

59

TGTGGGACCTCTGGCCTTGGC

chr11:105706113-105706195:+

miR-3922-3p

192

250

248

TGCGGGGCTAGGGCTAACAGCA

chr16:11,829,804-11,829,901:+

miR-744-5p

11,447

24,797

14,171

CTGTTGCCACTAACCTCAACC

chr16:11,829,804-11,829,901:+

miR-744-3p

75

81

104

TTTCCGGCTCGCGTGGGTGTGT

chr16:18,891,345-18,891,423:-

miR-1180-3p

30

133

77

CCGTCCTAAGGTTGTTGAGTT

chrX:68,990,098-68,990,174:+

miR-676-3p

46

206

206

TTCATTCGGCTGTCCAGATGTA

chrX:113,236,410-113,236,505:+

miR-1298-5p

246

893

852

CATCTGGGCAACTGACTGAACT

chrX:113,236,410-113,236,505:+

miR-1298-3p

30

98

58

TGAGTACCGCCATGTCTGTTGGG

chrX:113,271,154-113,271,232:+

miR-1911-5p

88

843

473