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Table 3 Significantly Altered mRNA and Proteins related to Amino Acid Catabolism

From: Polyomic profiling reveals significant hepatic metabolic alterations in glucagon-receptor (GCGR) knockout mice: implications on anti-glucagon therapies for diabetes

 

Transcriptomics

Proteomics

Amino Acid Metabolism

Adj. p-value

Fold change

Adj. p-value

Fold change

Alanine-glyoxylate aminotransferase (Agxt)*

1.02E-02

-1.8

1.82E-03

-1.2

Cystathionase (cystathionine gamma-lyase) (Cth)*

1.66E-02

-1.5

8.36E-04

-1.4

Glutamic-oxaloacetic transaminase 1, soluble (Got1)*

9.42E-03

-2.8

1.05E-05

-2.1

Glutamic-pyruvate transaminase (Gpt)*

1.42E-02

-1.6

9.90E-04

-1.3

Glutamic pyruvate transaminase 2 (Gpt2)*

1.52E-02

-1.5

  

Ornithine aminotransferase (Oat)*

1.08E-03

-5.0

2.52E-06

-2.3

Prolyl 4-hydroxylase, beta polypeptide (P4hb)*

1.62E-02

-1.4

  

Serine dehydratase (Sds)*

1.85E-02

-2.6

  

Serine dehydratase-like (Sdsl)*

1.89E-02

-1.5

  

Homogentisate 1,2-dioxygenase (Hgd)*^

4.28E-03

-1.7

2.41E-06

-1.4

Aminoadipate-semialdehyde synthase (Aass)^

1.00E-02

-1.5

  

3-hydroxyanthranilate 3,4-dioxygenase (Haao)^

4.33E-04

-2.4

4.57E-05

-1.4

Isovaleryl Coenzyme A dehydrogenase (Ivd)^

3.81E-03

-1.8

  

Kynureninase (L-kynurenine hydrolase) (Kynu)^

1.61E-02

-2.1

  

Tyrosine aminotransferase (Tat)^

1.72E-02

-2.2

  

Tryptophan 2,3-dioxygenase (Tdo2)^

3.03E-03

-1.9

  

Alanyl-tRNA synthetase (Aars)

8.80E-03

-1.3

  

δ-aminolevulinate synthase 2 (Alas2)

1.11E-02

-2.9

  

Aldehyde dehydrogenase 4 family, member A1 (Aldh4a1)

1.28E-02

-1.4

  

Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (Cad)

1.99E-02

-1.3

  

Cytochrome P450, family 7, subfamily B, polypeptide 1 (Cyp7b1)

3.45E-03

-3.1

  

Dopa decarboxylase (aromatic L-amino acid decarboxylase) (Ddc)

1.02E-02

-1.9

  

Formiminotransferase cyclodeaminase (Ftcd)

2.88E-03

-1.6

3.52E-03

-1.3

Glycine N-methyltransferase (Gnmt)

1.05E-02

-1.5

  

Sarcosine dehydrogenase, mitochondrial (Sardh)

  

3.73E-03

-1.2

Glucosamine-phosphate N-acetyltransferase 1 (Gnpnat1)

1.11E-02

-1.2

  

Leucine aminopeptidase 3 (Lap3)

3.45E-03

-1.4

6.01E-06

-1.2

Methyltransferase like 7B (Mettl7b)

2.02E-03

-1.6

  

4-hydroxyphenylpyruvate dioxygenase (Hpd)

  

9.17E-04

-1.3

Phenylalanine hydroxylase (Pah)

1.70E-02

-1.2

3.07E-05

-1.5

Branched-chain alpha-keto acid dehydrogenase complex component E2 (Dbt)

  

2.29E-03

-1.3

4-aminobutyrate aminotransferase, mitochondrial (Abat)

  

1.10E-03

-1.2

Urea Cycle & Metabolism of Amino Groups

    

Mitochondrial ornithine transporter 1 (Slc25a15)

9.92E-03

-1.4

  

Argininosuccinate synthetase 1 (Ass1)*

1.62E-02

-1.5

1.25E-07

-1.6

Argininosuccinate lyase (Asl)

  

1.35E-03

-1.2

Arginase 1 (Arg1)

  

1.53E-03

-1.2

Glutamate-ammonia ligase, Glutamine synthetase (Glul)*

  

1.04E-03

1.3

Carbonic anhydrase3 (C a3)

  

3.78E-03

-1.18

  1. *Involved in catalyzing amino acids for gluconeogenesis
  2. ^Involved in catalyzing amino acids for ketone bodies