Table 2 Comparison of DNA methylation levels with gene expression levels.
Gene name | Symbol | Chr. no | Expression level | Methylation level | Gene ID |
|---|---|---|---|---|---|
Matrix metalloproteinase 14 (membrane-inserted) alpha | mmp14a | 7 | ↑ | ↓ | ENSDARG00000002235 |
Histidyl-tRNA synthetase | hars | 14 | ↑ | ↓ | ENSDARG00000003693 |
Tubulin, alpha 8 like 4 | tuba8l4 | 6 | ↑ | ↓ | ENSDARG00000006260 |
E2F transcription factor 6 | e2f6 | 20 | ↓ | ↓ | ENSDARG00000008119 |
Acetoacetyl-CoA synthetase | aacs | 5 | ↑ | ↑ | ENSDARG00000012468 |
Nucleophosmin 1 | npm1 | 10 | ↑ | ↓ | ENSDARG00000014329 |
Cell division protein kinase 8 (probe 54) | cdk8 | 24 | ↑ | ↓ | ENSDARG00000016496 |
Cell division protein kinase 8 (probes 21, 31) | cdk8 | 24 | ↑ | ↑ | ENSDARG00000016496 |
Hepatoma-derived growth factor-related protein 2 | hdgfrp2 | 22 | ↑ | ↓ | ENSDARG00000019530 |
RAB2A, member RAS oncogene family | rab2 | 2 | ↑ | ↓ | ENSDARG00000020261 |
LIM domain containing preferred translocation partner in lipoma | lpp | 6 | ↑ | ↓ | ENSDARG00000023578 |
Insulin-like growth factor binding protein 5a | igfbp5b | 9 | ↓ | ↓ | ENSDARG00000025348 |
Mitogen-activated protein kinase 1 | mapk1 | 5 | ↑ | ↓ | ENSDARG00000027552 |
Cancer susceptibility candidate gene 3 protein homolog | casc3 | 3 | ↑ | ↑ | ENSDARG00000029911 |
Hnrpa0l protein | hnrpa0l | 14 | ↑ | ↓ | ENSDARG00000036161 |
Cyclin T2 | ccnt2 | 9 | ↑ | ↓ | ENSDARG00000036685 |
Proliferating cell nuclear antigen | pcna | 10 | ↑ | ↓ | ENSDARG00000054155 |
Ret proto-oncogene (probes 16, 19) | ret | 13 | ↓ | ↑ | ENSDARG00000055305 |
Ret proto-oncogene (probes 20, 24) | ret | 13 | ↓ | ↓ | ENSDARG00000055305 |
Integrin-linked kinase (probes 8, 1) | ilk | 10 | ↑ | ↓ | ENSDARG00000056964 |
Integrin-linked kinase (probes 6) | ilk | 10 | ↑ | ↑ | ENSDARG00000056964 |
Novel protein similar to vertebrate threonyl-tRNA synthetase | tars | 18 | ↑ | ↑ | ENSDARG00000075429 |
Ribonuclease inhibitor 1 | rnh1 | 22 | ↓ | ↓ | ENSDARG00000078234 |
Calpain 2, (m/II) large subunit, like | capn2 | 22 | ↑ | ↓ | ENSDARG00000034211 |
Synaptopodin-2 | synp02 | 7 | ↓ | ↑ | ENSDARG00000079675 |