Table 6 Predicted Glycine max mRNA targets for the novel miRNAs.
From: Identification of novel soybean microRNAs involved in abiotic and biotic stresses
miRNA ID | Locus targeta | Target descriptiona | miRNA/mRNA pairingb |
|---|---|---|---|
gma-MIR-Seq01 | Glyma13g01690 | glucuronosyl/glucosyl transferase | - | | | | | | | | | | | | | | | - : | |
Glyma14g35220 | glucuronosyl/glucosyl transferase | - | | | | | | | | | | | | | | | - : | | |
Glyma15g00330 | GTPase-activating protein | | | | - | | : | | | | | | | | | | - | | |
gma-MIR-Seq03 | Glyma08g22900 | LRR-containing proteins | - | | | | | | | | | : | | | | | | : | |
Glyma07g03200 | LRR-containing proteins | - | | | | | | | | | : | | | | | | : | | |
Glyma05g33790 | methyltransferase | | - | : | | | | | | | | | | | : | : | | |
Glyma04g00810 | EF-hand-containing proteins | | | : | | | | | - : : | | | | | | | | | |
Glyma11g34320 | EF-hand-containing proteins | | | : | | | : | | | : - | | | | | | | | |
Glyma10g06740 | triosephosphate isomerase | -- | | | | : | | | | | | | | | | | | | |
gma-MIR-Seq05 | Glyma07g18570 | pyruvate decarboxylase | | - | | - : | | | | | | | | | | | | | | |
Glyma01g29190 | pyruvate decarboxylase | | - | | - : | | | | | | | | | | | | | | | |
Glyma18g43460 | pyruvate decarboxylase | | - | | - : | | | | | | | | | | | | | | | |
gma-MIR-Seq06 | Glyma08g37480 | mt transcription factor | | : : - | | | | | | | : | | | | | | : | |
Glyma16g26070 | serine carboxypeptidase | | | | | | - | - | : | : | | | | | | | | | |
gma-MIR-Seq07 | Glyma04g01020 | fructose-bisphosphate aldolase | | | | | - | : | | | | | | | | | | | - | |
Glyma16g05500 | LRR-containing proteins | | | : | | : : | : | : | : | | | | | | | | |
Glyma19g27280 | LRR-containing proteins | | | : | | : : | : | : | : | | | | | | | | |
Glyma19g07240 | translation elongation factor | | | - | | | - | | | | | | | | | | | | - | |
gma-MIR-Seq08 | Glyma14g23860 | oxidoreductase activity | | | - | | | | | | | | | | | | | | | | - | |
Glyma13g03430 | oxidoreductase activity | | | - | | | | | | | | | | | | | | | | - | | |
Glyma01g20670 | nucleotide excision repair factor | | | | | | | | | | - | | | : | | | | | : - | |
gma-MIR-Seq10 | Glyma04g09770 | mt oxoglutarate/malate carrier | | : | | | : : | | | | | | : | : | | | | : |
gma-MIR-Seq11 | Glyma15g13500 | peroxidase activity | : : | | - | | | | | | | : | : | | | | | | |
Glyma09g02600 | peroxidase activity | | : | | - | | | | | | | : | : | | | | | | | |
gma-MIR-Seq12 | Glyma08g20670 | ATP-dependent RNA helicase | : | | | | | | | | | | : | | : | | | | | - |
Glyma07g01260 | ATP-dependent RNA helicase | : | | | | | | | | | | : | | : | | | | | - | |
Glyma20g16950 | predicted alpha/beta hydrolase | | | - | | | | | | | | : | | | | | | : | : | |
Glyma10g23470 | predicted alpha/beta hydrolase | | | - | | | | | | | | : | | | | | | : | : | |
Glyma19g35390 | serine/threonine protein kinase | | | | | | | | | | -- | | - | | | | | | | | |
Glyma03g32640 | serine/threonine protein kinase | | | | | | | | | | -- | | - | | | | | | | | |
gma-MIR-Seq13 | Glyma02g26160 | oxidoreductase activity | | - | | - | | | | | | | | : | | | | | : | |
Glyma10g31690 | transcription regulator activity | | | | | | | | | - | - | | | | | : : | | | | |
gma-MIR-Seq15 | Glyma20g02820 | translation initiation factor | -- | | | | | | | | | | | | | | | | | | | |
gma-MIR-Seq16 | Glyma17g20860 | LRR-containing proteins | | | | | | | | | | | | | - | | : | | | | | |
Glyma05g09440 | LRR-containing proteins | | | | | | | | | | | | | - | | : | | | | | | |
gma-MIR-Seq18 | Glyma11g21200 | LRR-containing proteins | | | : | | | | | | | | | | | | | | | | | -- |
gma-MIR-Seq19 | Glyma15g37290 | LRR-containing proteins | - | | | | | - | | | | | | | | | | | | | | - |
Glyma09g34200 | LRR-containing proteins | | : | | | : | | | : | - | | | | | : | | | | |