Analysis of BAC-end sequences in rainbow trout: Content characterization and assessment of synteny between trout and other fish genomes

Table 3 Rainbow trout BAC end sequences BlastN statistics

	Medaka	Stickleback	Zebrafish
Total BES with hits	15,896	17,499	14,716
BES with unique hits^a	15,379	15,612	13,868
BACs
BAC with one end	14,206	15,467	13,304
Paired BAC-ends	845	1,016	706
Paired BAC-ends with unique hits	792	812	632
Unique hits paired BAC-ends matched on the same chromosome	418	566	360
Also identified by BlastX	85	105	105
Microsynteny identified	307	421	176

^a The bioinformatic filtering criteria used for identifying 'unique' hits are described in the methods section.

ISSN: 1471-2164