Minimal regulatory spaces in yeast genomes

BMC Genomics

Table 1 Summary statistics for the inter-CDS length distributions across 11 yeast species.

Species	cat		old			young
		divergent	unidirectional	convergent	divergent	unidirectional	convergent
sce	Mean *	489	412	205	486	453	415
	location of lower limit **	172	159	49	27	12	19
ago	mean	322	291	106	531	416	227
	location of lower limit	78	63	9	59	58	10
cgl	mean	616	606	248	918	752	354
	location of lower limit	206	242	64	178	189	99
kla	mean	613	513	172	904	686	327
	location of lower limit	199	193	19	186	158	29
kpo	mean	853	725	213	1496	896	339
	location of lower limit	255	265	40	335	166	83
kth	mean	427	360	103	968	788	465
	location of lower limit	84	97	10	154	91	48
kwa	mean	345	340	88	433	370	464
	location of lower limit	88	74	8	17	18	16
sba	mean	518	438	217	1194	1071	909
	location of lower limit	173	165	52	168	194	153
sca	mean	380	360	158	643	467	231
	location of lower limit	122	130	43	129	118	39
skl	mean	412	445	155	920	745	511
	location of lower limit	95	111	18	111	65	36
zro	mean	408	312	96	750	538	273
	location of lower limit	100	85	9	138	95	30

* mean lengths were calculated as 10^(average(log10( inter-CDS lengths)));
** location of lower limit is defined by 2% quantile of the inter-CDS length distribution in each category.

ISSN: 1471-2164