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Table 1 Characteristics of genome segments and predicted functions of proteins in SMReV.

From: Turbot reovirus (SMReV) genome encoding a FAST protein with a non-AUG start site

  Gene Protein Predicted function
Genome segment Segment length (bp) GC% 5'UTR (bp) 3'UTR (bp) Nucleotide position of ORF Coding potential Protein size (aa) MM (KDa) Isoelectric point (pI)  
S1 3947 54.32 13 40 14-3907 VP1 1297 141.4 6.13 Core protein, capping enzyme
S2 3866 54.86 12 29 13-3837 VP2 1274 140.97 8.39 Core protein, polymerase
S3 3687 55.19 18 39 19-3648 VP3 1209 131.10 6.10 Core protein, Helicase, NTPase
S4 2640 57.54 24 162 25-2478 NS88 817 87.80 6.18 Nonstructural protein, involved in the formation of viral inclusion bodies with NS38
S5 2241 53.59 21 27 22-2214 VP4 730 80.52 7.23 NTPase
S6 2057 54.93 28 67 29-1990 VP5 653 69.25 4.69 Outer capsid
S7 1399 54.82 16 74 17-613 NS22 198 22.15 8.93 FAST protein
      489-1325 NS32 278 31.81 6.16 Nonstructural protein
S8 1317 55.50 12 51 13-1266 VP6 417 45.18 8.91 Core protein
S9 1118 56.26 25 40 26-1078 NS38 350 38.12 6.60 Nonstructural protein, involved in formation of viral inclusion bodies with NS88
S10 986 56.80 27 62 28-924 VP7 298 32.18 7.56 Outer capsid
S11 784 56.63 24 52 25-732 NS25 235 25.32 7.88 Nonstructural protein