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Table 2 Conserved terminal nucleotide sequences and percent sequence identities of genome segments and proteins between SMReV and other aquareovirus and orthoreovirus species.

From: Turbot reovirus (SMReV) genome encoding a FAST protein with a non-AUG start site

   S1 S2 S3 S4 S5 S6 S7 S8 S9 S10 S11 Conserved terminal nucleotide sequences
   nt aa nt aa nt aa nt aa nt aa nt   nt aa nt aa nt aa nt aa nt aa  
AQRV-A CHSRV 74 84 79 93 79 85 - - 72 80 75 85 74 61,50 79 88 78 85 71 76 83 - 5'-GUUUUA......UCAUC-3'
  TFRV - - - - - - - - - - 77 91 - - - - - - 77 84 84 86 5'-GUUUUA......UCAUC-3'
  SBRV - - - - - - - - - - - - - - 78 86 - - 77 84 - - 5'-GUUUUA......UCAUC-3'
  ASRV-TS - - 79 94 - - - - - - - - - - - - - - 73 78 - - 5'-GUUUUA......UCAUC-3'
  ASRV-2009 - - - - - - - - - - - - 78 73,76 - - - - 77 84 - - 5'-GUUUUA......UCAUC-3'
AQRV-C GCRV-873 55 44 60 59 57 52 13 26 17 35 57 53 3 23,20 36 44 54 41 5 13 3 19 5'-GUUAUU......UCAUC-3'
  GSRV 56 44 60 59 58 52 13 26 17 35 60 53 3 25,21 38 45 54 41 5 13 5 20 5'-GUUAUU......UCAUC-3'
AQRV-G AGCRV 52 44 60 58 57 53 13 23 10 35 56 51 5 21,26 38 40 25 37 8 17 7 23 5'-GUUUUA......UCAUC-3'
  GCRV-HZ08 6 30 37 42 9 34 - - 2 22 4 29 - - - - - - - - - - 5'-GUAAUU......UCAUC-3'
Orthoreovirus MRV-1 5 25 28 40 7 31 2 12 2 17 3 25 2 NE,8 2 22 2 11 3 8 NE NE 5'-GCUA...........UCAUC-3'
  MRV-2 3 24 24 40 3 31 1 13 2 18 4 25 2 NE,8 1 19 2 13 3 8 NE NE 5'-GCUA...........UCAUC-3'
  MRV-3 2 25 28 40 12 31 1 12 2 17 3 25 2 NE,4 2 20 3 11 3 8 NE NE 5'-GCUA...........UCAUC-3'
  ARV S1133 4 24 24 41 7 30 3 16 2 16 6 23 1 6,5 2 17 3 13 3 9 NE NE 5'-GCUUUU.......UCAUC-3'
  1. nt: nucleotide sequence
  2. aa: amino acid sequence
  3. "-": complete sequence not available
  4. NE: no equivalent sequence
  5. Abbreviations: CHSRV: Chum salmon reovirus; TFRV: Threadfin reovirus; SBRV: Striped bass reovirus; ASRV-TS: Atlantic salmon reovirus TS; ASRV-2009: Atlantic salmon reovirus 2009; GCRV-873: Grass carp reovirus 873; GSRV: Golden shiner reovirus; AGCRV: American grass carp reovirus; GCRV-HZ08: Grass carp reovirus HZ08; MRV-1: Mammalian orthoreovirus 1; MRV-2: Mammalian orthoreovirus 2; MRV-3: Mammalian orthoreovirus 3; ARV S1133: Avian orthoreovirus S1133